trnat-agu_14


Basic Information

Item Value
gene id trnat-agu_14
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2118747 ~ 2118820 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1104
GGTGCTGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAgatcctgggttcaaatcccagcagcGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1104 True 74 tRNA 0.53 1 2118747 2118820

Neighbor

gene id symbol gene type direction distance location
LOC120547899 LOC102301710,LOC107396804,LOC100696318 coding upstream 6876 2006144 ~ 2111871 (+)
trnat-agu_12 NA coding upstream 65746 2052927 ~ 2053001 (+)
trnat-ugu_6 NA coding upstream 72928 2045746 ~ 2045819 (+)
LOC120547583 opn4,LOC107372404 coding upstream 127933 1972182 ~ 1990814 (+)
trnat-agu_10 NA coding upstream 154648 1964026 ~ 1964099 (+)
trnat-agu_15 NA coding downstream 2572 2121392 ~ 2121465 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding downstream 74480 2193300 ~ 2200457 (+)
rps27a rps27a coding downstream 385947 2504767 ~ 2508381 (+)
LOC120548433 NA coding downstream 410360 2529180 ~ 2637276 (+)
LOC120548306 NA coding downstream 539037 2657857 ~ 2663678 (+)
G191213 NA non-coding upstream 1676 2101708 ~ 2117071 (+)
G191233 NA non-coding upstream 84691 2021693 ~ 2034056 (+)
G191214 NA non-coding upstream 118703 1999191 ~ 2000044 (+)
G191229 NA non-coding upstream 132997 1985439 ~ 1985750 (+)
G191227 NA non-coding upstream 135152 1972658 ~ 1983595 (+)
G191240 NA non-coding downstream 6382 2125202 ~ 2152936 (+)
G191241 NA non-coding downstream 20062 2138882 ~ 2192858 (+)
G191245 NA non-coding downstream 25853 2144673 ~ 2233390 (+)
G191219 NA non-coding downstream 26938 2145758 ~ 2207417 (+)
LOC120548168 NA non-coding downstream 59052 2177872 ~ 2185585 (+)
G191236 NA other upstream 14050 2047957 ~ 2104697 (+)
G191230 NA other upstream 114519 2002812 ~ 2004228 (+)
G191212 NA other upstream 169513 1948390 ~ 1949234 (+)
G190785 NA other upstream 338765 1701556 ~ 1779982 (+)
G190758 NA other upstream 503201 1581834 ~ 1615546 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 150008 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 637334 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 643230 2762050 ~ 2766062 (+)
G191571 NA other downstream 651813 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other downstream 656488 2775308 ~ 2778367 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnat-agu-151 NA coding NC_048591.1 CM023245.2 37505561 ~ 37505634 (+)