trnaq-cug_15


Basic Information

Item Value
gene id trnaq-cug_15
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 7951117 ~ 7951188 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1115
GGTTCTATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCTGAGTTCAAGTCTCAGTAGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1115 True 72 tRNA 0.46 1 7951117 7951188

Neighbor

gene id symbol gene type direction distance location
LOC120547971 LOC102778848,LOC102194630,LOC102290574,LOC101476901,LOC100711709 coding upstream 3296 7942709 ~ 7947821 (+)
LOC120547970 NA coding upstream 12621 7933125 ~ 7938496 (+)
chrna1 chrna1,LOC103363491,LOC446087 coding upstream 45372 7887988 ~ 7905745 (+)
cdh11 cdh11 coding upstream 160899 7693588 ~ 7790218 (+)
supt3h supt3h coding upstream 1090931 6842493 ~ 6860186 (+)
LOC120548260 LOC102194925,LOC102289369,LOC102779125,LOC100534467,LOC101476625,LOC104955261 coding downstream 16184 7967372 ~ 7970313 (+)
mtx2 mtx2 coding downstream 21243 7972431 ~ 7981678 (+)
cdh5 LOC104953929 coding downstream 69472 8020660 ~ 8057884 (+)
LOC120548392 LOC104932692,LOC100711168,LOC102780655,LOC102196724,LOC101475056 coding downstream 179394 8130582 ~ 8137806 (+)
LOC120548244 LOC101474016,LOC102312708,LOC102214986 coding downstream 304226 8255414 ~ 8328929 (+)
G192375 NA non-coding upstream 44177 7906570 ~ 7906940 (+)
G192359 NA non-coding upstream 115410 7835423 ~ 7835707 (+)
G192333 NA non-coding upstream 732093 7128852 ~ 7219024 (+)
G192329 LOC108281047 non-coding upstream 827939 7122200 ~ 7123178 (+)
G192283 cdc5l,LOC101487762 non-coding upstream 1088306 6860326 ~ 6862811 (+)
G192412 NA non-coding downstream 122593 8073781 ~ 8074959 (+)
G192413 NA non-coding downstream 173730 8124918 ~ 8125993 (+)
LOC120548141 NA non-coding downstream 175530 8126718 ~ 8129363 (+)
G192464 NA non-coding downstream 418190 8369378 ~ 8377699 (+)
G192530 NA non-coding downstream 906803 8857991 ~ 8904877 (+)
LOC120547751 LOC103371019,LOC107095977 other upstream 1146565 6800514 ~ 6804552 (+)
zc3h15 zc3h15 other upstream 1162031 6775743 ~ 6789086 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 1445266 6485581 ~ 6505851 (+)
si:dkey-22n8.3 LOC103376236 other upstream 1554218 6020122 ~ 6396899 (+)
bean1 bean1,LOC102779979 other downstream 115148 8066336 ~ 8119063 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other downstream 1163468 9114656 ~ 9195416 (+)
kcnq5a LOC101074332,LOC101486129 other downstream 1545603 9496791 ~ 9602882 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other downstream 1655337 9606525 ~ 9624564 (+)
arhgef33 arhgef33,LOC107098984 other downstream 1702716 9653904 ~ 9673252 (+)

Expression


Co-expression Network