G204553


Basic Information

Item Value
gene id G204553
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 20625414 ~ 20626461 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU277028
CGTCCATAAAGGTGCCTAATTTGTCAGTTTACTCCTCAATTATTTAAATAGATCTAAGAAGGGAGCGGAGAATAGGGCTTTTTCTGCCTCTTCGCAGTCAAAAGCAGAGAGAGACCTTTCTCCACGGTAGCCATTTTCAATTGCGCTCTGCACTGCTGTCTTTGATATACAGAAGTGCTGTAGAGGAGAGAGGCTGTATCAAATAAACAAATGTGTGTACACAAGATAACGGGAACTTGGGGATAATATTCAGTTTGTGCTAAAGAACTCagttattttacatttacaaattaaaACACTCTTTCCGAACATGTGCACACaaagtacacagacacactttaagATTGTGTCTGTGTCGTACattggcaaacacacacaaacaaacacacacacctatctgTGAGGATTTAGGTGAGGTTTGAAAATAAAGTAGGGACCCTTTGTTACTCATCCCTGTGCTCTTCCATCCATGCACACTGTCAGGTTATAACCCCACTCCCCACTATCCTATCAGCCCCCCACACCCAGCAGAAGTACCAGCTCACACCGCCTGGCAATGCCAGCTCTCAGCCAGAGAGACCACTGGAGGTATGTGGGGCCTGGGGCCATAGATTACCAAGCGGTTGAAGATTGATCCTGGAAATGGAGATGTTGCATTCCCCAACCCTCTGACCTCTAATCCCTCACATATCTGCTTctattgtttggtttgttttactAGAGGGGTGAGGTTGTGCAGGCTGAGGAGTATGAGGACGCTGTGACGGTGGAGGGGGTCCACACAGGGTCCTAAGGTGACCTTATCTTTCACATGCGTCTGGTGGAGGCAGGTAAAGGACCCTCTCTATGTCTGAATGCTTTGCCGCAAACCCATACTGAGATAAACTCTCATCTGTGCAACAACAATCACTTTCAATAAGCTCTATATCAGCAGTGATGCCAGCACTGCGTCCAGTCAGTGGCAGTACAATAGTCTGGGTGCGCCTACACAAAGACGTGAGCACCAAGACAATAACATAGTCCTTTACATACAGAAAAGACACTTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277028 True 1048 lncRNA 0.46 1 20625414 20626461

Neighbor

gene id symbol gene type direction distance location
vcpkmt vcpkmt,LOC102779043 coding downstream 78728 20545228 ~ 20546686 (-)
aspg aspg coding downstream 102024 20507499 ~ 20523390 (-)
kif26ab kif26a coding downstream 125457 20430934 ~ 20499957 (-)
c20h14orf180 LOC104921392,LOC103358498,LOC102293237,LOC101474620 coding downstream 355432 20252621 ~ 20269982 (-)
prph2la LOC103358986,LOC104921393,LOC102782215,LOC101158810 coding downstream 394664 20226944 ~ 20230750 (-)
otx2b otx2,LOC107085600,LOC100707476,LOC107392362 coding upstream 15745 20642206 ~ 20647599 (-)
exoc5 exoc5 coding upstream 75800 20702261 ~ 20713839 (-)
slc35f4 slc35f4,LOC102799952 coding upstream 99449 20725910 ~ 20743584 (-)
ngb ngb coding upstream 206247 20832708 ~ 20837147 (-)
fam161b NA coding upstream 212021 20838482 ~ 20845630 (-)
G204552 NA non-coding downstream 446 20624453 ~ 20624968 (-)
G204551 NA non-coding downstream 1298 20623902 ~ 20624116 (-)
G204550 tmem260 non-coding downstream 1695 20622134 ~ 20623719 (-)
G204541 NA non-coding downstream 33729 20590890 ~ 20591685 (-)
G204540 LOC103358400,LOC103459010,LOC107085641 non-coding downstream 34789 20587744 ~ 20590625 (-)
G204554 NA non-coding upstream 564 20627025 ~ 20628053 (-)
LOC120549236 NA non-coding upstream 94399 20720860 ~ 20723082 (-)
G204708 NA non-coding upstream 361641 20988102 ~ 20988908 (-)
G204713 NA non-coding upstream 377360 21003821 ~ 21005690 (-)
G204803 NA non-coding upstream 495717 21122178 ~ 21122419 (-)
itpk1b itpk1,LOC102785853 other downstream 535311 20041980 ~ 20090103 (-)
ppm1aa ppm1a other downstream 794485 19801275 ~ 19830929 (-)
itgb1bp1 itgb1bp1 other downstream 1492561 19128755 ~ 19132853 (-)
G203836 NA other downstream 2440840 18182055 ~ 18184574 (-)
LOC120549177 nt5e other downstream 2495006 18123139 ~ 18130408 (-)
zdhhc22 zdhhc22 other upstream 168405 20794866 ~ 20797775 (-)
G204685 coq6 other upstream 225635 20852096 ~ 20853084 (-)
LOC120548683 NA other upstream 364476 20990937 ~ 20992688 (-)
LOC120549379 LOC100705232,LOC102305635,LOC102778868,LOC104921326,LOC101482755 other upstream 1029759 21656220 ~ 21703770 (-)
LOC120549141 max,LOC103363129,LOC100701192,LOC101485218,LOC108232653,LOC102777802 other upstream 1125925 21752386 ~ 21757595 (-)

Expression


Co-expression Network