G211975


Basic Information

Item Value
gene id G211975
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 12810322 ~ 12811107 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU287287
AAAgataagacattttaaataaaaatcagtGTATACAGATTTGAGATAAAgattgtactgtatgtctttaAGTAGTCCACTTGGCACTAACTGAATACCAACTGGAACATACAATATACGCCACAATCTCAAGATGATTTATGCAGATCTCATCACTCTGACTGACATTTCTTGGTCATGGATATATAGGAACCAAACCCTCGTCTAAGCAGGCCAGTGATTTAAATGATAATCTCTCTTGGCACATGCAACAAATCTCTTCATTAAAAACAGGGCATGCCATTCAGCGTCCCTGTaaagcatggaggtggaaatCTATAGCATTTCACCCCCTGGTGAGAATTAATTCCTTGTGCATTTAAGCCAAACATCTTCCCCGACCAACGTTCAATCTTCAATCTGTTACTGTATGTCGCTCCCTGCTACAGTAAGCTCATTGGGAGCAAAACTCCTTCCAAACCTACATCTTTATGTCTTAATTCAGGAGATAAAATCTGGCAACAGTGTGTTAAGTGTCTGAGGTCAAGTTTCCTCAAAGAGCCATAGCAgtggttttgcatgttttagcaCATCTACTAACAATCATATTTACTTAAAAGCTAACAATTTTGCaatttcttctcctgaaaatctctccttcctgcttagcaaattCGCCATCATAAtcgcaatgcgccaaggtacaaatgcgcctggcttttaaagggaatgggagatgacactctatacactttattgcatgttacgcactaaacacacctatgattaattaagacactaagtaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287287 True 786 lncRNA 0.39 1 12810322 12811107

Neighbor

gene id symbol gene type direction distance location
polr3a polr3a coding downstream 136006 12647763 ~ 12674316 (-)
tbata NA coding downstream 181754 12619947 ~ 12628568 (-)
star2 LOC104935228,LOC104953856 coding downstream 203842 12600193 ~ 12606480 (-)
ndr2 nodal coding downstream 321270 12484793 ~ 12489052 (-)
lrrc20 NA coding downstream 325957 12480700 ~ 12484365 (-)
LOC120550680 vdac2,LOC104943447,LOC101464912 coding upstream 355405 13166512 ~ 13171227 (-)
LOC120550678 samd8 coding upstream 361103 13172210 ~ 13182351 (-)
kat6b kat6b,LOC102792766 coding upstream 388317 13199424 ~ 13223703 (-)
LOC120551192 vcl coding upstream 522224 13333331 ~ 13362001 (-)
dcakd dcakd coding upstream 570868 13381975 ~ 13387516 (-)
G211970 NA non-coding downstream 60253 12736124 ~ 12750069 (-)
G211924 NA non-coding downstream 164608 12645481 ~ 12645714 (-)
LOC120550730 NA non-coding downstream 302210 12506475 ~ 12508112 (-)
G211844 ndufb8,LOC102781364,LOC103142288 non-coding downstream 453172 12356204 ~ 12357150 (-)
G211807 lrit1,LOC103376248 non-coding downstream 682310 12126967 ~ 12128012 (-)
G211985 NA non-coding upstream 21118 12832225 ~ 12837429 (-)
G211986 LOC103369864,LOC101063934 non-coding upstream 22762 12833869 ~ 12861679 (-)
G212019 NA non-coding upstream 153663 12964770 ~ 12968948 (-)
G212022 NA non-coding upstream 171623 12982730 ~ 12985563 (-)
G212029 NA non-coding upstream 233290 13044397 ~ 13044822 (-)
LOC120551361 gpr26,LOC100699461 other downstream 833783 11969744 ~ 11976539 (-)
nrxn1a LOC103359661,LOC102307287,LOC101485300,LOC102791317,LOC102215553 other downstream 1751711 10996317 ~ 11058611 (-)
gch2 LOC103145127,LOC101161367,LOC103373802,LOC107085523,LOC102790074 other downstream 1878984 10926861 ~ 10931338 (-)
mta3 mta3 other downstream 1918331 10858399 ~ 10891991 (-)
prkcea prkce,LOC103370414 other downstream 2004235 10755052 ~ 10806087 (-)
LOC120551786 zcchc24,LOC104929980,LOC104967378,LOC103369865,LOC101487194,LOC100699813 other upstream 26743 12837850 ~ 12851133 (-)
LOC120550679 adk,LOC106959442,LOC103355368,LOC100702520,LOC101468113,LOC102794333,LOC102208066 other upstream 414419 13225526 ~ 13331422 (-)
adam11 NA other upstream 1410686 14221793 ~ 14259786 (-)
G212470 adrb1,LOC102789796 other upstream 1775519 14586626 ~ 14588985 (-)
ccdc186 ccdc186 other upstream 1789028 14600135 ~ 14627858 (-)

Expression


Co-expression Network