G212671


Basic Information

Item Value
gene id G212671
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 15569581 ~ 15698719 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU288282
TAAAAACCTTCAGCAAGTGTGCCCATGCATGATCATTTCCTGTCAGTAATGGAGCCCGGAGGAAGCtactagcgttagctagctgcttCTAATGGTGCTGAAGTAGCTGTAACAAGACAAAACGTGGCTAAATTTTCACAAAATAActctgagagaaagagagtacGTTCACTCGCCGTTCTCAACGTTTTCCCATTCAGCCAGTAGGTAGACAAACGTAAAGTAGCGTTAGCTGCTAATTTAGCACCAAAACAGCCTGCTGGCACCAACTTTCCCGGATGTGGAGGAAATACAGAGGTTTAATGTACAGTTAAAGAAGAGGCACTTTTCATCACTTGGTAAAGTAGCCTACTGGACGTCTGGCTTGGCATCAATGGTGACAGACTGAACTTTGGTAATATTCACCTGAGAGAAAACTGGCTGATGAATAATTGGACTATGAAATATTATCATTGAAGACATCAAAGGTGCGCTGGCAGAGGTCCCCCGAAGTGGACTGCGTCCTTTAAAGACAAACTCTAAGGGGAAGTATCAGAGCTGCAGTTTCCGTCTCAGTAACAACAGCATCCCTGACGTCACCGGCCTTCAGTACATTCTCAGCCACTTTCTGGCTCAACCGTCAAAGCTCGGCTGGCTGGACCTATCGTTTAACAAAATCACATGCATAGACCCGATTTTGTGTGAGCTGAGTGAATTGCGTGTGTTGTACCTTCACGGCAACAACATCTGGAATCTgtcagatgttgaccagctgaGAGAGATGCAGTATCTACACACCATCACGCTGCATGGGAATGCCATAGAAACCAACATAAACTACAGgaaTCATGTGATTACTGCCCTGCCTCATTTGAAGAAGATGGATTTCAGTGCTGTGACACGCGAACAGCAAGTCCTGGCAAATGTTTGGCATCACTGCAGAAATCGTGGGAAGAACACCAGGGAGAGCCTCCAGTGAAGTCATTCATTTGATTAATCGATTTTCAAGCCACTGCTGAAACAACTTTGGGAGTAAATATTTTCTTtcccaaaaatatttttatcctgttgaattgatttattaaaTGATGCCAGTAAAGCTTTctgtaatgacatttttttgtcagGTTACTTCTTTTGGAGTTAGTGTAGATAAATTATAGTATAAAAGGTAATTGACTGAACAACATAATGTTAAAATAACTGATAACCTATTAGTATTTTTTTGTCCATATAAAGTGTAGATTTATCTTCACAC
>TU288292
GTTTGAGAAAACTGAAGCACTCAGAGGAATCCCAGAGGAGAACGTACAGAAAGGCCTGAGGTGCGCTGGCAGAGGTCCCCCGAAGTGGACTGCGTCCTTTAAAGACAAACTCTAAGGGGAAGTATCAGAGCTGCAGTTTCCGTCTCAGTAACAACAGCATCCCTGACGTCACCGGCCTTCAGTACATTCTCAGCCACTTTCTGGCTCAACCGTCAAAGCTCGGCTGGCTGGACCTATCGTTTAACAAAATCACATGCATAGACCCGATTTTGTGTGAGCTGAGTGAATTGCGTGTGTTGTACCTTCACGGCAACAACATCTGGAATCTgtcagatgttgaccagctgaGAGAGATGCAGTATCTACACACCATCACGCTGCATGGGAATGCCATAGAAACCAACATAAACTACAGgaaTCATGTGATTACTGCCCTGCCTCATTTGAAGAAGATGGATTTCAGTGCTGTGACACGCGAACAGCAAGTCCTGGCAAATGTTTGGCATCACTGCAGAAATCGTGGGAAGAACACCAGGGAGAGCCTCCAGTGAAGTCATTCATTTGATTAATCGATTTTCAAGCCACTGCTGAAACAACTTTGGGAGTAAATATTTTCTTtcccaaaaatatttttatcctgttgaattgatttattaaaTGATGCCAGTAAAGCTTTctgtaatgacatttttttgtcagGTTACTTCTTTTGGAGTTAGTGTAGATAAATTATAGTATAAAAGGTAATTGACTGAACAACATAATGTTAAAATAACTGATAACCTATTAGTATTTTTTTGTCCATATAAAGTGTAGATTTATCTTCACAC

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0007049 cell cycle biological_process
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0015630 microtubule cytoskeleton cellular_component

KEGG:

id description
ko00970 Aminoacyl-tRNA biosynthesis
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU288282 True 1237 lncRNA 0.42 4 15569581 15698719
TU288292 False 830 lncRNA 0.42 4 15569581 15573579

Neighbor

gene id symbol gene type direction distance location
rbp4 rbp4,LOC102793456 coding downstream 388672 15177875 ~ 15180909 (-)
gfra1b gfra1 coding downstream 761735 14781002 ~ 14807846 (-)
afap1l2 NA coding downstream 867783 14660772 ~ 14701798 (-)
LOC120551609 NA coding downstream 1008500 14558733 ~ 14561081 (-)
LOC120550977 dclre1a,LOC102789213 coding downstream 1010896 14551134 ~ 14558685 (-)
LOC120551717 LOC102196433,LOC102301533,LOC102779331,LOC100690095,LOC101482489 coding upstream 111875 15810594 ~ 15822270 (-)
psmc5 psmc5 coding upstream 247107 15945826 ~ 15954713 (-)
smarcd2 smarcd2,LOC104953579,LOC104930392 coding upstream 256527 15955246 ~ 15964404 (-)
atxn7l3b LOC104953580,LOC103381412,LOC103358556,LOC100690536 coding upstream 266984 15965703 ~ 15970737 (-)
LOC120551490 NA coding upstream 272162 15970881 ~ 15978180 (-)
G212639 NA non-coding downstream 123284 15397178 ~ 15446297 (-)
G212585 pde6c non-coding downstream 370137 15196652 ~ 15199444 (-)
G212584 pde6c,LOC103354267 non-coding downstream 376024 15191977 ~ 15193557 (-)
G212566 NA non-coding downstream 674213 14894991 ~ 14895368 (-)
G212445 casp7 non-coding downstream 1037174 14529674 ~ 14532407 (-)
G212733 LOC101158484,LOC104953575,LOC106579101 non-coding upstream 130143 15828862 ~ 15830296 (-)
G212744 NA non-coding upstream 177801 15876520 ~ 15876920 (-)
G212941 NA non-coding upstream 282209 15980928 ~ 15981139 (-)
LOC120551380 NA non-coding upstream 294691 15993410 ~ 16050107 (-)
LOC120551262 NA non-coding upstream 384228 16082947 ~ 16084493 (-)
LOC120551617 LOC103151212,LOC108249191,LOC103365004,LOC102200715,LOC101480347,LOC102303649,LOC102780475 other downstream 12575 15360971 ~ 15557006 (-)
fra10ac1 fra10ac1 other downstream 349815 15201840 ~ 15219766 (-)
ccdc186 ccdc186 other downstream 941723 14600135 ~ 14627858 (-)
G212470 adrb1,LOC102789796 other downstream 980596 14586626 ~ 14588985 (-)
adam11 NA other downstream 1309795 14221793 ~ 14259786 (-)
cenpt NA other upstream 445050 16143769 ~ 16152343 (-)
ndufa4b LOC103358564,LOC101067754,LOC101168328 other upstream 454965 16153684 ~ 16155840 (-)
mazb maz other upstream 877706 16576425 ~ 16583715 (-)
taok2b NA other upstream 887655 16586374 ~ 16616597 (-)
G213155 NA other upstream 1058196 16756915 ~ 16757655 (-)

Expression


Co-expression Network