LOC120553593 (LOC104927640,LOC103363517,LOC102305443)


Basic Information

Item Value
gene id LOC120553593
gene name LOC104927640,LOC103363517,LOC102305443
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28149732 ~ 28293546 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792180.1
CCACCTCTTCCTTCTGATCCAGTGCCATGAATCAGCCTGGACAACAGCTGTTACCCACATAGAGGTCACTTTACCTCTCTTTCCATTACTTCAGTCCAGAGGATGCTGGGAATGTGTCGTGGGCGCAGGAAGTTCCTGGCGGCCTCTCTCGCTTTGCTCTTCATCCCAGCACTCACCTGGCTTTACCTGTCAGTCGGAAGCTTTCAAGAAAAAAATCCCTGTTCCTGCCCCACAGTGAAGCCCCTCCCCCTGTCTCCATTGGAAGTTCAATCATCAACGCCAGTGGGCGCAGCTGGCGAGCGGCAGGCCTTAGAGCTACGAGTCCGGGCAGTGGAGGAAGAGAACCGGGCACTGCGCCGTGAGCTGAGCCGGCCACCCAGGAGCCCATCCGCACGCCTTCCAAACGCTGGTCACCGTGGCAACCAAAGCCGAACCCATTCAGAGGAAGGCACCGGCGACAATGAGGGCCAGAAAGCTGCTGCAGTGGGAAACAGCTCAGACTGTGTGCAGTTACCAGTGGTGGATAAGTGTGAGACCATCCACGTGGCGATCGTTTGTGCAGGTTACAACGCCAGTCGAGACGTGGTGACACTGGTTAAATCTGTCCTTTTCCACAGcttgtgtttgtgtgtgtgtgtccacaggcGGAACCCACTACATTTCCATTTCATCACAGACTCCATTGCTCAGCAGATCCTGTCCTCTCTGTTCCATACCTGGATGGTCCCTGCCGTCAAGGTTGACTTCTATGATGCAGATGAGTTGAAGTCTGAGGTGTCATGGATTCCCAACAAACATTACTCTGGAATCTACGGCCTGATGAAGCTGGTACTCACTAAGACGCTACCGTCCGACCTGCAGAGAGTCATCGTCCTGGACACAGACATCACATTTGCCACTGACATCGCTGAACTCTGGGCTGTCTTCCACAAGTTCAAAGGTCAGCAGGTTCTTGGTCTGGTGGAGAACCAGAGTGACTGGTACCTGGGGAACCTGTGGAAGAACCATCGACCCTGGCCGGCTCTGAGCAGAGGCTTCAACACTGGTGAGGTTTGACAGGAGGACgtcatatatgcatatatgcatTCTTATATTAAAGAAAATCAGTATGCATGCTGATTATTGAGATTGCTGCAAAATATTATAACCTATCCGTATagctacgggccctcagagtgtggatgaaCCTATCATCTACagttccatggagagaaatagagcaaaa
>XM_039792181.1
CACCTCTTCCTTCTGATCCAGTGCCATGAATCAGCCTGGACAACAGCTGTTACCCACATAGAGGTCACTTTACCTCTCTTTCCATTACTTCAGTCCAGAGGATGCTGGGAATGTGTCGTGGGCGCAGGAAGTTCCTGGCGGCCTCTCTCGCTTTGCTCTTCATCCCAGCACTCACCTGGCTTTACCTGTCAGTCGGAAGCTTTCAAGAAAAAAATCCCTGTTCCTGCCCCACAGTGAAGCCCCTCCCCCTGTCTCCATTGGAAGTTCAATCATCAACGCCAGTGGGCGCAGCTGGCGAGCGGCAGGCCTTAGAGCTACGAGTCCGGGCAGTGGAGGAAGAGAACCGGGCACTGCGCCGTGAGCTGAGCCGGCCACCCAGGAGCCCATCCGCACGCCTTCCAAACGCTGGTCACCGTGGCAACCAAAGCCGAACCCATTCAGAGGAAGGCACCGGCGACAATGAGGGCCAGAAAGCTGCTGCAGTGGGAAACAGCTCAGACTGTGTGCAGTTACCAGTGGTGGATAAGTGTGAGACCATCCACGTGGCGATCGTTTGTGCAGGTTACAACGCCAGTCGAGACGTGGTGACACTGGTTAAATCTGTCCTTTTCCACAGgcGGAACCCACTACATTTCCATTTCATCACAGACTCCATTGCTCAGCAGATCCTGTCCTCTCTGTTCCATACCTGGATGGTCCCTGCCGTCAAGGTTGACTTCTATGATGCAGATGAGTTGAAGTCTGAGGTGTCATGGATTCCCAACAAACATTACTCTGGAATCTACGGCCTGATGAAGCTGGTACTCACTAAGACGCTACCGTCCGACCTGCAGAGAGTCATCGTCCTGGACACAGACATCACATTTGCCACTGACATCGCTGAACTCTGGGCTGTCTTCCACAAGTTCAAAGGTCAGCAGGTTCTTGGTCTGGTGGAGAACCAGAGTGACTGGTACCTGGGGAACCTGTGGAAGAACCATCGACCCTGGCCGGCTCTGAGCAGAGGCTTCAACACTGGTGAGGTTTGACAGGAGGACgtcatatatgcatatatgcatTCTTATATTAAAGAAAATCAGTATGCATGCTGATTATTGAGATTGCTGCAAAATATTATAACCTATCCGTATagctacgggccctcagagtgtggatgaaCCTATCATCTACagttccatggagagaaatagagcaaaa
>XM_039792183.1
CACCTCTTCCTTCTGATCCAGTGCCATGAATCAGCCTGGACAACAGCTGTTACCCACATAGAGGTCACTTTACCTCTCTTTCCATTACTTCAGTCCAGAGGATGCTGGGAATGTGTCGTGGGCGCAGGAAGTTCCTGGCGGCCTCTCTCGCTTTGCTCTTCATCCCAGCACTCACCTGGCTTTACCTGTCAGTCGGAAGCTTTCAAGTGAAGCCCCTCCCCCTGTCTCCATTGGAAGTTCAATCATCAACGCCAGTGGGCGCAGCTGGCGAGCGGCAGGCCTTAGAGCTACGAGTCCGGGCAGTGGAGGAAGAGAACCGGGCACTGCGCCGTGAGCTGAGCCGGCCACCCAGGAGCCCATCCGCACGCCTTCCAAACGCTGGTCACCGTGGCAACCAAAGCCGAACCCATTCAGAGGAAGGCACCGGCGACAATGAGGGCCAGAAAGCTGCTGCAGTGGGAAACAGCTCAGACTGTGTGCAGTTACCAGTGGTGGATAAGTGTGAGACCATCCACGTGGCGATCGTTTGTGCAGGTTACAACGCCAGTCGAGACGTGGTGACACTGGTTAAATCTGTCCTTTTCCACAGcttgtgtttgtgtgtgtgtgtccacaggcGGAACCCACTACATTTCCATTTCATCACAGACTCCATTGCTCAGCAGATCCTGTCCTCTCTGTTCCATACCTGGATGGTCCCTGCCGTCAAGGTTGACTTCTATGATGCAGATGAGTTGAAGTCTGAGGTGTCATGGATTCCCAACAAACATTACTCTGGAATCTACGGCCTGATGAAGCTGGTACTCACTAAGACGCTACCGTCCGACCTGCAGAGAGTCATCGTCCTGGACACAGACATCACATTTGCCACTGACATCGCTGAACTCTGGGCTGTCTTCCACAAGTTCAAAGGTCAGCAGGTTCTTGGTCTGGTGGAGAACCAGAGTGACTGGTACCTGGGGAACCTGTGGAAGAACCATCGACCCTGGCCGGCTCTGAGCAGAGGCTTCAACACTGGTGAGGTTTGACAGGAGGACgtcatatatgcatatatgcatTCTTATATTAAAGAAAATCAGTATGCATGCTGATTATTGAGATTGCTGCAAAATATTATAACCTATCCGTATagctacgggccctcagagtgtggatgaaCCTATCATCTACagttccatggagagaaatagagcaaaa

Function

NR:

description
PREDICTED: LARGE xylosyl- and glucuronyltransferase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792180.1 True 1225 mRNA 0.52 6 28149732 28293546
XM_039792181.1 False 1197 mRNA 0.52 6 28149733 28293546
XM_039792183.1 False 1197 mRNA 0.52 6 28149733 28293546

Neighbor

gene id symbol gene type direction distance location
LOC120552999 NA coding upstream 126114 28016843 ~ 28023618 (+)
LOC120553234 LOC104948514,LOC103363512 coding upstream 190334 27849737 ~ 27959398 (+)
kiss2 NA coding upstream 453015 27695624 ~ 27696717 (+)
spx spx coding upstream 498650 27648003 ~ 27651082 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding upstream 504853 27637088 ~ 27644879 (+)
LOC120553840 NA coding downstream 286941 28580487 ~ 28580602 (+)
LOC120553854 NA coding downstream 518306 28811852 ~ 28811952 (+)
LOC120553851 NA coding downstream 519779 28813325 ~ 28813435 (+)
LOC120553852 NA coding downstream 526399 28819945 ~ 28820054 (+)
LOC120553849 NA coding downstream 527829 28821375 ~ 28821482 (+)
G230991 NA non-coding upstream 34296 28115187 ~ 28115436 (+)
G230989 NA non-coding upstream 44485 28105041 ~ 28105247 (+)
G230987 NA non-coding upstream 45813 28103676 ~ 28103919 (+)
G230985 NA non-coding upstream 60836 28088361 ~ 28088896 (+)
G230983 NA non-coding upstream 61516 28087495 ~ 28088216 (+)
G231017 NA non-coding downstream 9921 28303467 ~ 28303840 (+)
G231019 NA non-coding downstream 43435 28336981 ~ 28337998 (+)
G231020 NA non-coding downstream 50222 28343768 ~ 28343971 (+)
G231021 NA non-coding downstream 57483 28351029 ~ 28351443 (+)
G231022 NA non-coding downstream 60547 28354093 ~ 28354305 (+)
G230975 NA other upstream 91514 28057731 ~ 28058218 (+)
G230904 NA other upstream 202259 27941321 ~ 27947473 (+)
G230842 NA other upstream 546030 27603005 ~ 27603702 (+)
LOC120553194 NA other upstream 1077180 27069077 ~ 27072552 (+)
LOC120553759 NA other upstream 1177879 26693356 ~ 26971853 (+)
trnat-ugu_41 NA other downstream 177260 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 177560 28471106 ~ 28471178 (+)
LOC120553833 NA other downstream 207688 28501234 ~ 28501419 (+)
LOC120553776 NA other downstream 319009 28612555 ~ 28630012 (+)
G231113 NA other downstream 351490 28645036 ~ 28645537 (+)

Expression


Co-expression Network