trnag-gcc_18



Basic Information


Item Value
gene id trnag-gcc_18
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28852517 ~ 28852587 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1540
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTCCGATTCCCGGCCAATGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1540 True 71 tRNA 0.63 1 28852517 28852587

Neighbor


gene id symbol gene type direction distance location
trnag-gcc_17 NA coding upstream 1292 28851155 ~ 28851225 (+)
trnag-acc NA coding upstream 1978 28850469 ~ 28850539 (+)
trnac-gca_35 NA coding upstream 2319 28850128 ~ 28850198 (+)
trnag-gcc_16 NA coding upstream 3005 28849442 ~ 28849512 (+)
trnag-gcc_15 NA coding upstream 4028 28848419 ~ 28848489 (+)
trnac-gca_36 NA coding downstream 611 28853198 ~ 28853268 (+)
trnag-gcc_19 NA coding downstream 952 28853539 ~ 28853609 (+)
trnag-gcc_20 NA coding downstream 3000 28855587 ~ 28855657 (+)
trnac-gca_37 NA coding downstream 3681 28856268 ~ 28856338 (+)
trnag-acc_1 NA coding downstream 4022 28856609 ~ 28856679 (+)
G231135 NA non-coding upstream 59772 28791960 ~ 28792745 (+)
G231132 NA non-coding upstream 80948 28770614 ~ 28771569 (+)
G231129 NA non-coding upstream 84887 28767321 ~ 28767630 (+)
G231125 NA non-coding upstream 106390 28745902 ~ 28746127 (+)
G231122 NA non-coding upstream 108179 28744071 ~ 28744338 (+)
LOC120553132 NA non-coding downstream 23876 28876463 ~ 28877100 (+)
G231166 NA non-coding downstream 122449 28975036 ~ 28975830 (+)
LOC120553663 NA non-coding downstream 176390 29028977 ~ 29031361 (+)
LOC120553830 NA non-coding downstream 203548 29056135 ~ 29056327 (+)
LOC120553845 NA non-coding downstream 204142 29056729 ~ 29056839 (+)
G231113 NA other upstream 206980 28645036 ~ 28645537 (+)
LOC120553776 NA other upstream 222505 28612555 ~ 28630012 (+)
LOC120553833 NA other upstream 351098 28501234 ~ 28501419 (+)
trnak-uuu_24 NA other upstream 381339 28471106 ~ 28471178 (+)
trnat-ugu_41 NA other upstream 381639 28470806 ~ 28470878 (+)
G231160 NA other downstream 133735 28986322 ~ 28992193 (+)

Expression



Co-expression Network