tacr2 (tacr2,LOC103373147)


Basic Information

Item Value
gene id tacr2
gene name tacr2,LOC103373147
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 30353428 ~ 30361232 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794962.1
ACTTACACACTCcaggagagacagaaacagtgtgtgcatgtcagggagagatagatagagagagagaatgtgctGAGATGTCTTGATGGATTATTGGATGGACATGCTTGTTAATTTTCAGACATTATTTACTATGGATTGGACAAATGTTAAAACTGACAACTCAACCGCTTAATCAGGTGAACAAGGAGAAGATCATGGACGCGGAGAGTCTTATTCAACACATTGAACGAGAGATGGAGGCCACTTCTTTACCGTTTTCAGTGAGCACCGACTGGCTGGAGGACGGAAACGAGACGATTGGGAATCAGTTCcagcagcccgactggcaggtGGCTCTGTGGGCCATAGCCTACTCCCTCATCATCCTGGTGTCCATCACTGGTAACGTCACAGTGATCTGGATTATTCTCGCTCATAGACGCATGAGGACTGTGACCAACTACTTCATCGTCAACCTTGCCTTCTCTGACGTTTCCATGGCAACCTTCAACACTCTTTTTAACTTTGTCTATGCGCTTCACAATGACTGGTACTTTGGCCTGGGCTACTGCCGATTTCAGAACTTCTTTCCCATCACGGCCATGTTTTCATCAATATACTCGATGGCTGCCATCGCAGTGGACAGGTACATGGCCATCATCCATCCTCTGAAGCCCCGCCTCTCCTCTACATCTACAAAGGTCGTGATCGCCCTGATTTGGGCCGTAGCAATCTCACTGGCTTTCCCTCAGTGCTACTACAGCGTGACAATGTTTTACTACCCAAGAACTGTGTGCATGGTCAACTGGCCTGATGATTATGGAGGAACACATCAACTAAGTTACCAGTTTGCAGTGATATTGCTGAGCTACTTGCTCCCTCTACTGGTAATGCTGGTGACCTACAGTTTGGTTGGCCAATCGTTGTGGGGTGGGCACATCCCTGGAGAGGCGACATACCACTACCACAGCCAGATAACAGCCAAGAGAAagGTGGTGAAGATGatggttgtggtggtggtgacCTTTGCCATGTGCTGGTTGCCCTACCACATCTACTTCATACTGGGATCATTTAACAGAGACATTTATAAACAACATTACATTCAACAGGTGTATCTGGCCATATTCTGGTTGGCGATGAGTTCGACCATGTACAATCCTATCATTTACTGCTGTctaaatcaaagGTTTCGTGCAGGTTTCCGTCATGCGTTTGCTTGGTGTCCCTTCATCCAAGTGTCGGAGGAAGACAGGATGGAATTGCAGCACACGCACACCTTCAGAGTCACGATGACACGCAGCCACCGCAATGACAGTACATATGCACACACCTCcatcaaaacaaacaacaccTTCGACACAAATTTGTCTGTCAGCACTCAGCTAAACAAAGAGAGAGATTCTTGCTTGCAGCTTCAAAAATCACCATCGGAAGCATACAGCGCACATGCAGTGAAGAGGCCGGACAACACAAAATCCCCAGCAGCCAAACTTATGCAGCGTAGCCGCTGACTACTGAAACAATTCACGATGAGCACATTCACCATGGGAAGGCAACAGGGTTTTTCTACAGTGACAACAGATAGTAAATAGACTGCAGCCAATAAAGAATAGAGGAGAGcctgctgactgctaaacagagTGGAGCAAACATGATGACATTCATCCATGTGGAAAACCTTGAAGTAAAGAGTTGTTCATTGGACCTGGCTTGGGACCAATAATCTTCTTTGTTAAAGAGGAATATAAATGAATGTGACTTTCAAGCTGATGGATGTTTTGCTGTAAATGCCAAAGTGGTCATATGAGCTTGTGTAGAGAGGCTTATTCCTACAAGTGTTTGCTGTTAATGGAAAAGTCTGTAGATAAATCCGTCCATCATTCATTTCTTTTACTGAAGCCcattctccttcctcctccctccatcgTCTATATACTTTCTTTCATCACTGACTTTTTCTGCGTCTGTTGTGAACTTTGGATACGTTTGTGTAACTGTAAAGTTTTTTGTGTGGTTACTGGTATTTCAACAGCATGTAATGGATGAACAGTCCACTGGCATCAGCACCAAGCCttaatattgttgtttttatggggtttcttcttttttattgccACAGAAATGGGACTTTGAAAAAggttttcttttctcaaagggACATTTTCTATTGCATTTCTTTCTTCACCAATCACAACACAAAGTTGTAATTAAAGTTAACCTTTGGTAGCTCagtttattaaagaaaaaaaagtattttctaaCAGTTAGTGTGGGATCAGCCATATTGATGACCTTATAACAAATTACTTTCATTAGTAAAGATCTGTCTAAGGAACTCTGTGGTATAAATTTGGAAGTTAAGGATTTTTTTGTCAATACTGCTGTCCCTACTGTTGGAActgaaataaagaaaagtaaCTTAAAGTAAATTTATTTACACAGGATGTAACATGTAGCAGCAGGGCCCATATGGAACGACTGGAAATGTATAGAAAATGTTGAGTATATCCTTATATACTCAACATTTTCTATGTCAAAGTGTTATCACCACAATTTCAGTAGTAGCGAGGGCACCTCCTCCTGTGTCTAACataaatatcaaaatatatcaacACTGACATTAACTGATTATTATACATTTtagaagtaaaaaacaaaattgaattGACCTTATTTCATAGACTTTGCTGGATCTGTCTCATTATCAGTTATATGGTGAACATGTATCTGTTACTGTACAGTGCTTTCCGTTTAACATATCAGTCACATAGTGTAcattcatacagtatgttgctCATATATTGTGACTTCACTGGTTTATGCAACAGTCATTTTTTGGTCAGTGGTCAGTGTGCAATACAGTCCACATTAAAAAGTAAGTGCTGCTACTAAGAAGAATGTGATGTAAAATGTTATCTATTGAGTATATATTAATGTAGAAAATGCTGATGAAGTGGACATGTAACTATGGGACTTTGTGATGGTTGTGCACATACAGTAGGAACATAATGTTATAAATAGTGTCCCCTGTTAGCGTCAACATTTCAGAATGTAGAGAAAAACCTTTTGATTCCTTGTAACATCTCTTGACTTTcaaatacagtacacacagtGACAAAGTGAAACATTTGTATATGTTGTCTACACAAAGCAGCAGGGTAGTTGTATGTGCCTAAataaaatttataaaatatttaataaa

Function

symbol description
tacr2 Predicted to enable substance K receptor activity. Predicted to be involved in positive regulation of flagellated sperm motility. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and sperm midpiece. Human ortholog(s) of this gene implicated in asthma. Orthologous to human TACR2 (tachykinin receptor 2).

NR:

description
neuromedin-K receptor-like

GO: NA

KEGG:

id description
K04224 TACR3; tachykinin receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794962.1 True 3187 mRNA 0.41 8 30353428 30361232

Neighbor

gene id symbol gene type direction distance location
ddx21 ddx21,LOC102783051 coding downstream 174814 30166818 ~ 30178614 (-)
rnaset2 rnaset2,LOC103368766,LOC104927783 coding downstream 800955 29541607 ~ 29552473 (-)
LOC120555582 LOC106964557,LOC103462855,LOC102220269,LOC103136529 coding downstream 814693 29522758 ~ 29538735 (-)
rcn1 rcn1,LOC102786392 coding downstream 977828 29352248 ~ 29375600 (-)
eif3m eif3m coding downstream 1026964 29318089 ~ 29326464 (-)
LOC120556252 pbld coding upstream 81015 30442247 ~ 30446660 (-)
rufy2 rufy2,LOC102778539 coding upstream 96008 30457240 ~ 30487984 (-)
LOC120556254 LOC104944274 coding upstream 128091 30489323 ~ 30491474 (-)
mis12 mis12 coding upstream 205558 30566790 ~ 30568574 (-)
rhoua rhou,LOC108237402,LOC107381884 coding upstream 245415 30606647 ~ 30610958 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding downstream 9526 30343416 ~ 30343902 (-)
G30969 NA non-coding downstream 64995 30162480 ~ 30288433 (-)
G30905 NA non-coding downstream 691340 29661668 ~ 29662088 (-)
G30898 NA non-coding downstream 737053 29615440 ~ 29616375 (-)
G30852 pax6 non-coding downstream 956745 29386757 ~ 29396683 (-)
G31024 NA non-coding upstream 46873 30408105 ~ 30410056 (-)
G31027 LOC104955499,LOC103375803 non-coding upstream 60458 30421690 ~ 30424323 (-)
G31110 NA non-coding upstream 208655 30569887 ~ 30585456 (-)
G31115 NA non-coding upstream 217054 30578286 ~ 30579304 (-)
G31146 NA non-coding upstream 338171 30699403 ~ 30726354 (-)
LOC120556497 csmd1,LOC102783723 other downstream 387681 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 892192 29402035 ~ 29461236 (-)
prrg4 NA other downstream 1038719 29310550 ~ 29314709 (-)
LOC120555471 hipk3 other downstream 1084245 29217853 ~ 29269183 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other downstream 1506463 28770001 ~ 28846965 (-)
fam120b fam120b,LOC104944276 other upstream 154023 30515255 ~ 30532142 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 1747340 32108572 ~ 32117250 (-)
G31602 ddx28,LOC106597432 other upstream 2530267 32891499 ~ 32894405 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 2981015 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 3075579 33436811 ~ 33471335 (-)

Expression


Co-expression Network