nmbb (nmb,LOC102778922)


Basic Information

Item Value
gene id nmbb
gene name nmb,LOC102778922
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 33218994 ~ 33219856 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795499.1
ACTTGGACATTTGCACCCTGGAGGACAGTTCGCCGCTCCGCGTTGAGATGAAAGGGTTTACGCTGAATAATGTTTGCCAGTGTGGCTTATTTGCTTATCTTGTCTTATTTTCTTTCATGTCTTTTACCGCCGCAGTCAGTTTCGACCTGACTGAGCTTAGGAATAAAGTTGCAAAAATTAAAGTGAATCCAAGAGGCAATCTTTGGGCTACAGGACATTTCATGGGGAAGAAGAGTGTGATGGATACCCCTCTGCTGCCTTCAGCTGAGGGGCATGGCGCTGATGCACTGGAAGACACTGCGGGGCAGAGCGCTCTCGTGGAGCTTTTCCAAGAGTTCCTGAAGGTGGCGTTACAAGCGCAGGTGGATACACTGGAGAGCCGCACGAAAACTCAGGAGGGGGACATGTTGATGAAGATTTTAGAAAGCTACATCCAACGCAGAAAGTGATACAGAGGATGTCTGGCACGCATGGACACGGATGCGGGGTCATCTGGGCTCATGGgttcaaataaatacattagtCGCAG

Function

symbol description
nmb Predicted to enable neuromedin B receptor binding activity and neuropeptide hormone activity. Predicted to be involved in positive regulation of hormone secretion. Predicted to be located in extracellular region. Predicted to be active in neuron projection. Implicated in obesity.

NR:

description
PREDICTED: neuromedin-B

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795499.1 True 529 mRNA 0.49 3 33218994 33219856

Neighbor

gene id symbol gene type direction distance location
tspan3b LOC103354951,LOC103379383,LOC100690696,LOC102779206 coding downstream 4295 33209144 ~ 33214699 (-)
nfatc3a nfatc3 coding downstream 333125 32817597 ~ 32885869 (-)
LOC120556015 amfr,LOC102783722 coding downstream 445272 32763628 ~ 32773722 (-)
gnpnat1 gnpnat1 coding downstream 457888 32756857 ~ 32761106 (-)
nudt19 NA coding downstream 1045446 32169844 ~ 32173548 (-)
sec11a sec11a,LOC107691153,LOC107562127 coding upstream 2454 33222310 ~ 33230983 (-)
alpk3b NA coding upstream 17438 33237294 ~ 33250606 (-)
cry5 LOC103354946,LOC104961892 coding upstream 34773 33254629 ~ 33262933 (-)
LOC120556152 LOC103374289,LOC104951771,LOC103354964 coding upstream 134005 33353861 ~ 33360306 (-)
LOC120556151 LOC103374288,LOC102776139,LOC100696842 coding upstream 142956 33362812 ~ 33390311 (-)
LOC120556104 NA non-coding downstream 122016 33092815 ~ 33096978 (-)
G31650 LOC103354965,LOC101471800,LOC102779778,LOC100700520,LOC108237345 non-coding downstream 134514 33081722 ~ 33084480 (-)
G31636 LOC105930492 non-coding downstream 200252 33012880 ~ 33018742 (-)
G31624 NA non-coding downstream 221573 32934711 ~ 32997421 (-)
G31704 NA non-coding upstream 45462 33265318 ~ 33265675 (-)
G31705 NA non-coding upstream 109757 33329613 ~ 33333019 (-)
G31706 NA non-coding upstream 113242 33333098 ~ 33333938 (-)
G31707 NA non-coding upstream 114098 33333954 ~ 33335405 (-)
G31820 NA non-coding upstream 494444 33714300 ~ 33715276 (-)
G31602 ddx28,LOC106597432 other downstream 324589 32891499 ~ 32894405 (-)
cdc42se2 cdc42se2,LOC103398548 other downstream 1101744 32108572 ~ 32117250 (-)
fam120b fam120b,LOC104944276 other downstream 2686852 30515255 ~ 30532142 (-)
LOC120556497 csmd1,LOC102783723 other downstream 3253247 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 3757758 29402035 ~ 29461236 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 122391 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 216955 33436811 ~ 33471335 (-)
serf2 NA other upstream 346515 33566371 ~ 33569379 (-)
LOC120555494 arpp19,LOC101481874,LOC103358163 other upstream 587062 33806918 ~ 33816388 (-)
G31955 NA other upstream 1270804 34490660 ~ 34599541 (-)

Expression


Co-expression Network