trnal-uaa_2


Basic Information

Item Value
gene id trnal-uaa_2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27880131 ~ 27880213 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_142
ACCAGgatggccgagtggttaaggcgttGGACTTAAGATCCAATGGGCAAAAGCCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_142 True 83 tRNA 0.65 1 27880131 27880213

Neighbor

gene id symbol gene type direction distance location
LOC120556190 LOC104927843,LOC104965371,LOC100704236 coding downstream 8874 27863663 ~ 27871257 (-)
kif7 kif7 coding downstream 24544 27841587 ~ 27855587 (-)
si:ch211-122f10.4 LOC104945215,LOC102776050,LOC102212265,LOC101480742 coding downstream 225723 27649504 ~ 27654408 (-)
gfod2 gfod2,LOC102778057 coding downstream 333327 27541636 ~ 27546804 (-)
LOC120556121 NA coding downstream 341924 27519857 ~ 27538207 (-)
foxf1 foxf1 coding upstream 212845 28093058 ~ 28097147 (-)
irf8 irf8 coding upstream 318897 28199110 ~ 28203878 (-)
dusp22a LOC104927513,LOC103374648 coding upstream 325513 28205726 ~ 28224206 (-)
LOC120555377 LOC101062555,LOC102216107,LOC102302772,LOC101473643 coding upstream 345411 28225624 ~ 28227538 (-)
gse1 gse1 coding upstream 359317 28239530 ~ 28420256 (-)
LOC120556451 NA non-coding downstream 41435 27828047 ~ 27838696 (-)
G30496 NA non-coding downstream 50153 27827418 ~ 27829978 (-)
G30484 NA non-coding downstream 89133 27790638 ~ 27790998 (-)
G30442 NA non-coding downstream 218294 27661351 ~ 27661837 (-)
G30418 NA non-coding downstream 260258 27619064 ~ 27619873 (-)
G30517 NA non-coding upstream 15316 27895529 ~ 27895841 (-)
G30519 NA non-coding upstream 17730 27897943 ~ 27898385 (-)
G30551 LOC102797876,LOC102077336,LOC101469017,LOC102307906,LOC103372225 non-coding upstream 76034 27956247 ~ 27957624 (-)
G30576 mc1r non-coding upstream 120984 28001197 ~ 28001428 (-)
G30579 NA non-coding upstream 130787 28011000 ~ 28019075 (-)
G30465 furin,LOC102777676 other downstream 108321 27766831 ~ 27771810 (-)
G30422 got2 other downstream 246509 27626893 ~ 27633622 (-)
G30319 NA other downstream 563973 27310171 ~ 27316158 (-)
tcf12 tcf12,LOC103372397 other downstream 627048 27164599 ~ 27253083 (-)
atxn1l atxn1l,LOC102793200 other downstream 1065181 26801793 ~ 26814950 (-)
G30577 mc1r other upstream 121427 28001640 ~ 28002470 (-)
dbndd1 dbndd1,LOC103136566 other upstream 166546 28046759 ~ 28073479 (-)
LOC120555801 LOC103366895,LOC102194278,LOC102079963,LOC102301182,LOC101475385,LOC102792507 other upstream 567743 28447956 ~ 28550000 (-)
G30693 NA other upstream 788978 28669191 ~ 28669868 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other upstream 889788 28770001 ~ 28846965 (-)

Expression


Co-expression Network