G35741


Basic Information

Item Value
gene id G35741
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 3790004 ~ 3791973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47892
GAATATCTGCCGAAGATTCGAAGATGGCTTTAAGGTCCTAGTACCCACAGTGCTTAGATTGACTCAAAGGAAATCTCCCCTTGCAGATCTGGCTTTGCATGAAAGAGAGGCTGCCCTCACCGAAGATGTCCCTGGGATTGATTTCAGAGCTGCAATCCTGCTGTTGCCGATCCTGTTCAGGGAGAAAAATGACATTCTCGTCATACTTGGGGAGAATCAGCCACCGTCGCCATATTCTACTGTACAATTCCACAATGTTGCTGACTGGAGGACTGTGCTCACTCAAAGGGTCCCTGCAGTGGTCAAACTGGATTCAGTCAGTCTGCTGATGTTTCCCTTCAAATCTCATGCACCGTAAAGGACCGTAGGACAACATTAGACTAGAATAATGGATCAAGTAATGACATTTTGGAGTTATCACATTTCCAAACTCTTTTTCcataacacacaaaaactcaGAAACTAATTGGTCAAGAAGACGAAGAGGagagtctttttttatttatttttttacaagcgGTGCCATTAGCCTTCAGGTACCCTGTGAGCATCAAGAAGGCGGAATAAACTTCTGTGAAGCACATCCAACAACACTGGATCCATGTAAAGTATTTTTTGAGAAAGCCACAGGCTTATTTGTCCTATCATTTTGTCCAGTAGACATCTTTCTTAGTTCCTCATTTAGTTCTTGTATGGTTATATGTTTTTCTTGATGAGCTTTACATACAACAAGCCTCAATACCAACGATGCTACACCCTCCAAGAAATCATGCATGACATCTGGAGAAGAAATGTTGTGACGTCAAAGTAATCTAATTGGTCAAATACACGTCCACCACAAACTCCATACattccttttgttttctttgttttacacATTCTAAATGGTATCTGTGTACATACACATTTCTTAAAACAAAATCTGATTCACTGAAGTTCTTTTTCATCTGCGAGGGAGTAGCAATGCAGTATCTACAGATTCCACCAGCACCAAAAGACATGGTAAATCCACCTACCATGTGAgatgtagggctgctccctcttagtggattagtcgactaatcggtggttctggtcttagtcaacttagatctctttagtccattagtcatgtttgatgcttttttcatgctgaatgacttatttccaagaaacgtacgagcacatctctggtaaacactaggggtggggggaaaaaatcgatacagcatagtatcggaatattttccgtggcaatactgtatcgatacacagacgccaagtatggatcttttatTATGATATatctgttggtcagtttgtctgattgacaatcccattttgcagcaatacaattgaagtgagatgaacaaacagagaaatgtatctcttgtctttagataaaacagatgttgacaaagttttcttttggggacataatttgaaattgggaaaaaatggaagttggaaaaaaggtaataaattacaatatattgcagaatattgcaatatctttaaaattgcaataatattgtatcgtgacgtatcgtgatgatattgtattcccacccctagtaaaaACAAGAATCAAAGTGGTGCTTTaacatgactctttgcggagaaactcagatttacagatttgtcgattaaatcaaccaattgcttagtcgatacaattgaatgagtgagTTTCTTAAGGTCAT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU47892 True 1682 lncRNA 0.39 3 3790004 3791973

Neighbor

gene id symbol gene type direction distance location
c4h1orf50 LOC103374819,LOC106909683,LOC106955718 coding upstream 23964 3759494 ~ 3766040 (+)
trnae-cuc_3 NA coding upstream 504103 3285830 ~ 3285901 (+)
trnae-cuc_2 NA coding upstream 507002 3282931 ~ 3283002 (+)
mtss1 LOC102789651,LOC101478388 coding upstream 716734 2964127 ~ 3073270 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding upstream 840437 2916796 ~ 2949567 (+)
nuf2 nuf2 coding downstream 15199 3807172 ~ 3830945 (+)
cfap92 NA coding downstream 102332 3894305 ~ 3913220 (+)
hdac11 hdac11 coding downstream 423551 4215524 ~ 4242500 (+)
fbln2 NA coding downstream 480969 4272942 ~ 4361643 (+)
elf3 elf3 coding downstream 585345 4377318 ~ 4386408 (+)
G35737 NA non-coding upstream 21616 3767852 ~ 3768388 (+)
G35736 NA non-coding upstream 22428 3767376 ~ 3767576 (+)
G35718 NA non-coding upstream 112251 3670690 ~ 3677753 (+)
G35704 NA non-coding upstream 148597 3640919 ~ 3641407 (+)
G35627 NA non-coding upstream 516458 3273147 ~ 3273546 (+)
G35833 NA non-coding downstream 576718 4368691 ~ 4369050 (+)
G35834 NA non-coding downstream 577946 4369919 ~ 4370221 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding downstream 813487 4605460 ~ 4610060 (+)
G35941 NA non-coding downstream 818565 4610538 ~ 4613004 (+)
G35942 NA non-coding downstream 823920 4615893 ~ 4617397 (+)
epha8 epha8,LOC102791453 other upstream 200392 3453600 ~ 3589612 (+)
G35618 NA other upstream 431184 3244231 ~ 3358820 (+)
G35578 NA other upstream 772879 2930924 ~ 3017125 (+)
G35534 NA other upstream 1042232 2747220 ~ 2747772 (+)
G35364 NA other upstream 1201842 2583514 ~ 2588162 (+)
G35791 LOC101072424,LOC104921976 other downstream 156861 3948834 ~ 3950128 (+)
G35921 NA other downstream 695562 4487535 ~ 4585475 (+)
LOC120557928 NA other downstream 737860 4529833 ~ 4532862 (+)
cdk5rap1 cdk5rap1 other downstream 1119726 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 2128951 5920924 ~ 5924400 (+)

Expression


Co-expression Network