LOC120558193 (camkv,LOC102778568)


Basic Information

Item Value
gene id LOC120558193
gene name camkv,LOC102778568
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 6948075 ~ 6996717 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48749
ggggatttCCATGGGCTAACCAAACAGAACTATGGGTTTTCATTAAAACAGCAGCCACATTGTCAATACTATTGTTAGATGATATAATTAGAGTATAATATGTTATGGCTCGTTCACAGCCACTTTGTCCGACTCGACCCAATCTGTTGTTAAGTGTGAACACCTGTGAATTTATAAGAAAATGTGCatttcagatttaaaaaaaaagggggctcTGGAGAAAATGTATCACCTTTATAATCCGTAGAATCTCAAGTTTGACTTTGTTTTTGCAgtctttttatttatacatgtactgtatctCCTTTTAATTTGTGCTAAGGTAGATGGGTAGACACACTAATCATTATGATTATACCACTATATCATTTCTTACATTGTTTAAGATAAATATTTAGATTTTAACGAGAGGCTTAAAGAAGAATATCAGAGATTTTTATGTGAATTGATTATTTCATGTAGTCCGTTCTCTTTGTTTAGATGGCAAATAAATACTGTTTGAACACTGTTACACAGTTTAAAGCAAGCTTTTTCCCCCAATACATTTCTTACTGTATTTAGTATTCCATGTCTGTTCATTTTACCATGCACTTACAGGCATATTTGTAGATGTGATGTTTGCCAGGACCAGTGGTCACATGTAGGTCCTGTCTTGCATTTGTGAGCTCTGTACTGTACTCCTTGATTGAGTTGATGACTTTGATGGTaataaaaattataattcaCC
>XM_039799132.1
GACGCGCGCAGGCACAACAGATGGTACAGTACTACAGGCTGCAGGAGCGCACGAATTTGATGTAGAagtacttttatttctttaaacttcACAGGAACGTTTAGTGTAATAGGAGAAGGAACTCGACTTTGACAGCCACTGGATCCTACGTTTAGAGGCGGAATTTGGTGTCAAGGTCAGGAGTGGCCATGCCATTTGGCTGTTTAACAATTGGGGAAAAGAAGGATTATAGCAATCCTTCGGACGTGACAGATAAATATGACCTGGGTCAGATTGTTAAATCGGAGGAGTTCTGTGAGATATTCAGGGCCAAGGACAAAACTACAATGAAAATGTATACATGCAAAAAGTTCCTGAAAAAGGACGGAAGGAAAGTCCGCAAGGCCGCGAAAAATGAGATTGTCATCTTAAAGATGGTGAAGCATCCCAACATTCTCCAACTGGTGGACGTCTTCGAGACCAAAAAAGAGTACTTCCTCTTCCTTGAACTTGCAACAGGCAGAGAGGTATTTGACTGGATCCTGGACCAAGGCTACTACTCAGAGCGAGACACCAGCAACGTGGTGCGCCAGGTGCTGGAGGCTGTCGCCTACCTCCACTCCCTGCATATCGTTCACAGAAACCTCAAGTTGGAGAACTTGGTTTACTACAATCGCCTGAAGCACTCTAAAATAGTCATCAGTGACTTCCATCTTGCCAAGCTGGAGAACGGACTAATCAAAGACCCCTGTGGGACACCAGAGTACCTGGCTCCAGAGGTGGTTGGCAGACAGCGATATGGCAGGCCCGTGGACTGCTGGGCAACAGGTGTCAtcatgtacatactGCTGTCAGGCAACCCTCCTTTCTACGATGAAACCGACGACGATGATTTTGAAAATCATGACAAGAACCTGTTCCGAAAGATCCTGGCAGGCGATTATGAGTTTGACTCTCCGTACTGGGATGAAATCTCAGATTCAGCCAAGAGTCTGGTTGCTCTTCTGATGGAGGTGGATCAAGACCAGAGACTGACAGCCCAGGAGGCTATAAACCATGAATGGATCTCTGGCGGTGCAGCTTCAGATAAGAACATCAAGGAAAATGTGTGTGCACAAATAGAGAAGAACTTTGCCAGAGCTAAATGGAAGAAAGCTGTGCGAGTCACCACCATCATGAAGAGACTGCGAGCCCCCGAGCAGAGTGACTCGAGGGCAACCAGCCCTGCAGCCGGTGCCCCAGCAGACGCCGCGGCTCCCCAGGCTGCCACCGACCCCACTGCACCCTCATCTGACACAACACCTGAGGGAGCGCCCGCTGCCGTCACAGAGCTCCCTGCTGGAGCGGAGATAAGTCAACCGGCGCCAGAGGCTACAGCCGGGGTGGCTACAGCCGGGGTGGCAGCCTCAGCCGGGGTGGCAGCCTCAGCCGAGGCGCCACAAGAACCGAGCCCAGCGCCGCAGGAGGCCGAGCCCACATCGCGTTGTAATGGAGAAGCTTCGGCTGCTCTTCACGCAGCCACTGATGCCGGGGACGAGCAGGGTtagacccccccacccccccttccTGCGTGACCTCTGCAGTCCCCACCAACTCCTGCACACTGTACATTACCTGCTAGCATGGTGACACAGACTCTGCTTCTCTCTCACTTGCAGCATTAGTATCATCTCATGGAGGCTGTGTGCTACCTTTCCCGAGTGCTGCGCTGCATTGGCTTTCTTTCTACATTTATTGTGTCTTTTTTCACTGACCCTCCGGTGTTTTATGTCAGGTTATATAAACCATCTTTCTCCGCACATTTGAGTTTAAGGGGCAAAAAACAGATTTACTGTCGAGCTGTGGCTTGCAGCTAAAGTCTTCTTTCTTATTGTTCTCTTAGCGATAAGAGAATATAGGAAGACATAATTGTGCTGAAAACGGCTTTGATTCCTTTTTAATGAGCCAACTTGGGAAACTTCCCTCTGCCAGTCTTGCAATTACAGTATTTGTTCTTAGAATCAGTGGAAAGTTTTGCTTCTGAAATGTTGACCTTGTACCGTGATACTCAGTAAGTGCTGGTCCTCACACATGAAGAAGATCACATATTCCTGTCACAGGGAAAATATGCTTATCTTTCTTATTTGTTCAAGTCTACACTAACCAGTTATTGTACGTTAAACAATGCTGAGATTGGTGACTGGGAGTTATTATGCCCAGTACTGTATTTTGAAGTAGGCAGCTtcacacataagcacacacacaaacactatgtTCCTTTGCTTACTTCCTGCTCAGGAAAGAACCTAATAGCTGTAAGTGTAAAGATTCTGTATATAGAGACCTTTGTAGAAGTAGCCAAAACAGCAtgcgttctcactttttgcTGTTCGTTTTACATTTACAGCCACTTGGTGGATAAGGATGTGCTACTGCCAAACTTCATCTTAATGCAGTAAACAGCACCCTCGTCTCTTGCCACAAGCCATGCCGaggctaatgttttttttcaaaagcacTATACATTATGCTGTCTATTACCACTGTTCATTTAGCACCCCTGCTGTCAATGTAAGTcatatgaaaaaaaactaaaaaacagtCTTCATTACATAGCAGTTCTATGCATCCAAATTAATTTGTagcttttcatttttagaaactCCATGACATGATTTATTCATCACGTGACAATAACTGTTTTTTTCTTGGTCTACTTGTATCTACTTTGATTTAATCATGTCCTTCGTCTTCGGTTATTGACTCAAAATGTCACATATGTCTTATTATTTGGTTGTaactgtaaaacaaaatgtgcatTAACTGACCACATGCGGCGTTTTAGGGAGAGATTAATCGTTTTGACTTTGTGGTAACTAGGGTCACCTTCaccaactcagctttgttgacctatatacatatatatatattatatgaagCATATGTTTGACATTTCTGAACttattgtgtatttatttggATTTTGTTATTGCcatatttctttttgttgttgtttttttgactcTTTCAGTCATGTGTTGATTCCATAGATGTTTCTCCTTATACTTGATAAACAGTAATAACAATCTTTCCTTTCTTGTCACTGGTCCCCTCGAGTATTAATAATGAGCTACAGAAAAAGTTCTCTGTAATCACTCTAGAGGAAATTGAGCAATATTTGAACGGCTGCAGAAACTGTGATTCCTGGTGTCCTTTCGATACAGTCGATGTACCTGTAAGTGGAAGTCTATAGTCCTTGCCAGCTGTCAAGCCCATCAGGGCCACTTAAGTAACACATGGCTGCAGTcagataaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggggatttCCATGGGCTAACCAAACAGAACTATGGGTTTTCATTAAAACAGCAGCCACATTGTCAATACTATTGTTAGATGATATAATTAGAGTATAATATGTTATGGCTCGTTCACAGCCACTTTGTCCGACTCGACCCAATCTGTTGTTAAGTGTGAACACCTGTGAATTTATAAGAAAATGTGCatttcagatttaaaaaaaaagggggctcTGGAGAAAATGTATCACCTTTATAATCCGTAGAATCTCAAGTTTGACTTTGTTTTTGCAgtctttttatttatacatgtactgtatctCCTTTTAATTTGTGCTAAGGTAGATGGGTAGACACACTAATCATTATGATTATACCACTATATCATTTCTTACATTGTTTAAGATAAATATTTAGATTTTAACGAGAGGCTTAAAGAAGAATATCAGAGATTTTTATGTGAATTGATTATTTCATGTAGTCCGTTCTCTTTGTTTAGATGGCAAATAAATACTGTTTGAACACTGTTACACAGTTTAAAGCAAGCTTTTTCCCCCAATACATTTCTTACTGTATTTAGTATTCCATGTCTGTTCATTTTACCATGCACTTACAGGCATATTTGTAGATGTGATGTTTGCCAGGACCAGTGGTCACATGTAGGTCCTGTCTTGCATTTGTGAGCTCTGTACTGTACTCCTTGATTGAGTTGATGACTTTGATGGTaataaaaattataattcaCCTGTTTA

Function

symbol description
camkv Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Predicted to be active in glutamatergic synapse and postsynapse.

NR:

description
PREDICTED: caM kinase-like vesicle-associated protein

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08812 CAMKV; CaM kinase-like vesicle-associated

RNA

RNA id representative length rna type GC content exon number start site end site
TU48749 False 727 lncRNA 0.34 1 6948081 6948807
XM_039799132.1 True 4109 mRNA 0.43 11 6948075 6996717

Neighbor

gene id symbol gene type direction distance location
arl6ip5a LOC103355433,LOC101069168 coding downstream 418688 6523581 ~ 6529387 (-)
mitfa LOC108247580,LOC103355437 coding downstream 493797 6429473 ~ 6454278 (-)
zgc:113054 LOC103355438 coding downstream 537629 6396244 ~ 6410446 (-)
gpr27 gpr27,LOC103355443,LOC102784210 coding downstream 833493 6111648 ~ 6114582 (-)
gxylt2 gxylt2 coding downstream 990885 5931606 ~ 5957190 (-)
mst1rb mst1r coding upstream 55405 7052122 ~ 7073901 (-)
mon1a mon1a coding upstream 78202 7074919 ~ 7081647 (-)
grm6b LOC103365912 coding upstream 92559 7089276 ~ 7109076 (-)
comtb comt coding upstream 112888 7109605 ~ 7116032 (-)
LOC120557080 srpk3,LOC103365909,LOC100693513,LOC102304520,LOC101464872 coding upstream 119875 7116592 ~ 7127707 (-)
G36366 NA non-coding downstream 72029 6875846 ~ 6876046 (-)
G36357 NA non-coding downstream 175617 6772238 ~ 6772458 (-)
G36356 NA non-coding downstream 176566 6771133 ~ 6771509 (-)
G36354 NA non-coding downstream 179545 6766998 ~ 6768530 (-)
G36351 NA non-coding downstream 186970 6760622 ~ 6761105 (-)
G36380 NA non-coding upstream 17594 7014311 ~ 7014545 (-)
G36414 NA non-coding upstream 124890 7121607 ~ 7122039 (-)
G36423 NA non-coding upstream 131996 7128713 ~ 7129325 (-)
G36425 NA non-coding upstream 149357 7146074 ~ 7147051 (-)
G36489 NA non-coding upstream 188462 7185179 ~ 7187208 (-)
ghrh ghrh,LOC108251004 other downstream 2033918 4906359 ~ 4914157 (-)
LOC120556780 LOC106958509,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other downstream 2343581 4604118 ~ 4604494 (-)
LOC120557507 NA other downstream 2362630 4487787 ~ 4585445 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other downstream 2525697 4406456 ~ 4422378 (-)
iqsec1b iqsec1,LOC101485759,LOC104921976 other downstream 2757343 3944224 ~ 4190732 (-)
mbd1b NA other upstream 151274 7147991 ~ 7161998 (-)
si:dkeyp-97e7.9 LOC103365916,LOC104945761 other upstream 332749 7329466 ~ 7334361 (-)
arhgap46a LOC103358831 other upstream 531952 7528669 ~ 7593448 (-)
LOC120557337 LOC104966450 other upstream 670947 7667664 ~ 7704445 (-)
LOC120557774 ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 other upstream 1416009 8412726 ~ 8414933 (-)

Expression


Co-expression Network