G43132


Basic Information

Item Value
gene id G43132
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 32847551 ~ 32847906 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57936
CCCgatcagtcgaacgacgaacgccgtgcttggGCTATATTACCGGTTACCGGTTGCACAGCGTTcaccggatttctcctttaaagaCAAAATGCATCGTTTGTAACTGCATTTCAGAACGACACGCGTTTTCAGATTTTACGCAGCTGtggttaaggtttggttaggtttgggGAATGATCATCATGAGTTGGGTTGAAATAAACTGTACTTTCTTACAGTTTTGGAGCGGCCGCCGTTACGGTTAAAAGAAACCAACGTTGACTGTCGGTACAGCGaatattttcaaacatttcCACCCCTTTCTCGAAAGGTCCTGCCTGCAGCTTTAGGTGTTACACATAGACGAGTCTTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57936 True 356 lncRNA 0.46 1 32847551 32847906

Neighbor

gene id symbol gene type direction distance location
psmf1 psmf1 coding upstream 13060 32819970 ~ 32834491 (+)
ripor3 LOC100693168,LOC104944097 coding upstream 116798 32647599 ~ 32730753 (+)
rspo4 LOC103374720,LOC103367962 coding upstream 403227 32380682 ~ 32444324 (+)
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding upstream 1430059 31377980 ~ 31417492 (+)
LOC120558103 slc6a6,LOC103364884 coding upstream 1974045 30821681 ~ 30873506 (+)
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding downstream 154197 33002103 ~ 33033297 (+)
LOC120557808 NA coding downstream 498885 33346791 ~ 33348566 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding downstream 503462 33351368 ~ 33351936 (+)
LOC120557839 LOC107671222,LOC106963510,LOC107723971 coding downstream 505500 33353406 ~ 33353823 (+)
LOC120557833 LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC101485372,LOC103379246 coding downstream 587621 33435527 ~ 33436108 (+)
G43131 NA non-coding upstream 4345 32839749 ~ 32843206 (+)
G43111 NA non-coding upstream 77949 32769256 ~ 32769602 (+)
G43106 NA non-coding upstream 91879 32750792 ~ 32755672 (+)
G43089 blcap non-coding upstream 103167 32672237 ~ 32744384 (+)
G43049 NA non-coding upstream 378468 32468847 ~ 32469083 (+)
G43135 NA non-coding downstream 2487 32850393 ~ 32850620 (+)
G43174 NA non-coding downstream 25237 32873143 ~ 32875614 (+)
LOC120556764 NA non-coding downstream 61282 32909188 ~ 32911875 (+)
G43195 LOC104931984,LOC102207393,LOC107384966,LOC102780474 non-coding downstream 114345 32962251 ~ 32966282 (+)
LOC120557802 NA non-coding downstream 195202 33043108 ~ 33055383 (+)
G43051 LOC102201960 other upstream 375946 32470795 ~ 32471605 (+)
G43045 NA other upstream 386688 32460132 ~ 32460863 (+)
ergic3 ergic3,LOC102788871 other upstream 2711717 30109535 ~ 30135834 (+)
G42449 NA other upstream 3605298 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 5024291 27670963 ~ 27823260 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 190028 33037934 ~ 33041311 (+)
G43277 NA other downstream 339832 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 414289 33262195 ~ 33336767 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other downstream 492378 33340284 ~ 33345806 (+)
G43656 NA other downstream 1817330 34665236 ~ 34667182 (+)

Expression


Co-expression Network