G43409


Basic Information

Item Value
gene id G43409
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33553375 ~ 33555178 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58284
tcctggggcctgtttcacaaaaccaggataagggattaagccgggatttcccagttatcctggctcaatttagccttgactcggtttcacaaaagcggaggcacataaatcaccatggagatttattctgtgcagctagcctgctcctgaccaggctaacagccaggatttatttaatcctggaaccttttctgttcacccagcactggttttaccctattgttattatcagcctggattaaaatacagcatattgctgttcatttaagaaaagtTATTggttaaagttgtgaccattatttttttataattattcatgtgacagtcattgttactgttatattgctgtatgaagactgatgttcatattgttgttagaagtttgatgaatatattatggcagtttttGAGatgattagaaaaggctgataaaatttaaaatgtgtttcaaatgaagtctgttactaagggcaatatatacaatgctgtacatttctatagttgatcaatgcaccttgaattattttggttgagaattaatttttttattattctttaacaataaggatcgtgtttattcctctttcatgtgcattgtatttggaattcttagcacacaatttgtgttgtccagtaaactgggactataatttgggaggattgaacaattttaagaacatattcttattgtacaatcctcccaaattatagtcttagttcactggaccagtaaatctagtgatgtaggctactgtacattcatataACAACAGGTAGAGGGcaactcaatggtttttgaacttttttgctggggggaaataactgatgaatatactctgttccattcatgtttacagtgtgcatggaatttatcacttaattatctttatattttctagattttagtccaatttcttcagtgtctttattttctatgtccatacagtatatgagggagaaagaaactcgtcctctataaaaaataaaaaaaacgcgagaaaaagcgtggcagataatagcggaccgactgaatgctagtctaaaaatatccatttatgaaatactgctcttaactgaaaccattcaatgagtcactgtcatttgcaaaaactaaCAGTTGTATGCTACACTTTGCATTACTttgttaatatgacttaggaaatttatattttagcccatgagagagagagagagagagaaagagagagagagagagagagagagagatagagagggaggaatagagtgaaagagatatttacgcatcatattttagcgttgtagaaaattgatcttgatGGTAAATttcaaggcaaagagtacaactgttaatttttgaaaatgattagtagcctaatccttgaatggtatgattatgacggtttcaattcagagctgTGGTCAGTTATGTTTAGGCTGCTtacacattcagtcggtccgtgatcgtctgctgcgctttttctcgctgtttcattacagtggccgtgtttcttttctttttatacaaatcatgtgtttcacgtcatcatacttccacaagaagctgctgctcactctgtataaagtatgtacaatacgtattctccattttggcatcactaaatctgtgatcgacctcgcggtcttttgaggaaagccgtggacgcgcatctatctgaattacttcagcctggctcaacctagtcgctcctcctcagcctggcttggccttcgtgaaacgcaccaagccaggatgcacagattagactaggtcaagcctcgctttatcagttatcctggatttagatattctgcttttgtgaaa

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: striated muscle preferentially expressed protein kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58284 True 1804 lncRNA 0.37 1 33553375 33555178

Neighbor

gene id symbol gene type direction distance location
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 35251 33516838 ~ 33518124 (+)
LOC120557832 LOC106528837,LOC107102779 coding upstream 49067 33503798 ~ 33504308 (+)
LOC120557833 LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC101485372,LOC103379246 coding upstream 117267 33435527 ~ 33436108 (+)
LOC120557839 LOC107671222,LOC106963510,LOC107723971 coding upstream 199552 33353406 ~ 33353823 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding upstream 201439 33351368 ~ 33351936 (+)
barx1 barx1 coding downstream 204912 33760090 ~ 33765508 (+)
znf831 NA coding downstream 471133 34026311 ~ 34040283 (+)
LOC120557827 NA coding downstream 492254 34047432 ~ 34067342 (+)
LOC120557093 NA coding downstream 815051 34370229 ~ 34371094 (+)
LOC120557490 NA coding downstream 1449764 35004942 ~ 35006128 (+)
G43408 NA non-coding upstream 11709 33541460 ~ 33541666 (+)
G43395 NA non-coding upstream 33306 33519863 ~ 33520069 (+)
G43356 NA non-coding upstream 129560 33388181 ~ 33423815 (+)
G43330 NA non-coding upstream 215127 33337962 ~ 33338248 (+)
LOC120557802 NA non-coding upstream 497992 33043108 ~ 33055383 (+)
G43412 NA non-coding downstream 4122 33559300 ~ 33563489 (+)
G43413 NA non-coding downstream 13289 33568467 ~ 33568910 (+)
G43444 NA non-coding downstream 221012 33776190 ~ 33776391 (+)
LOC120557846 samd3,LOC101476819 non-coding downstream 229149 33784327 ~ 33785135 (+)
G43452 NA non-coding downstream 312402 33867580 ~ 33868547 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 207569 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 216608 33262195 ~ 33336767 (+)
G43277 NA other upstream 341057 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 512064 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 1081770 32470795 ~ 32471605 (+)
G43656 NA other downstream 1110058 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 1908594 35463772 ~ 35486235 (+)
G43924 NA other downstream 2108965 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 2407361 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 3148077 36703255 ~ 36711295 (+)

Expression


Co-expression Network