G43444


Basic Information

Item Value
gene id G43444
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33776190 ~ 33776391 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58340
gttttgtcttttggctAATTAGCTGTAAACTCAAGACACTGGCTGCGTAGTCTTTTGTTCATCACCACTCCATCCACACAAGCCAAGAAAAACTTTCTGGGGTAGGAGCTGGAAGGGACTGCtgcctgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58340 True 202 lncRNA 0.48 1 33776190 33776391

Neighbor

gene id symbol gene type direction distance location
barx1 barx1 coding upstream 10682 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 258066 33516838 ~ 33518124 (+)
LOC120557832 LOC106528837,LOC107102779 coding upstream 271882 33503798 ~ 33504308 (+)
LOC120557833 LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC101485372,LOC103379246 coding upstream 340082 33435527 ~ 33436108 (+)
LOC120557839 LOC107671222,LOC106963510,LOC107723971 coding upstream 422367 33353406 ~ 33353823 (+)
znf831 NA coding downstream 249920 34026311 ~ 34040283 (+)
LOC120557827 NA coding downstream 271041 34047432 ~ 34067342 (+)
LOC120557093 NA coding downstream 593838 34370229 ~ 34371094 (+)
LOC120557490 NA coding downstream 1228551 35004942 ~ 35006128 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 1387093 35163484 ~ 35199996 (+)
G43413 NA non-coding upstream 207280 33568467 ~ 33568910 (+)
G43412 NA non-coding upstream 212701 33559300 ~ 33563489 (+)
G43409 NA non-coding upstream 221012 33553375 ~ 33555178 (+)
G43408 NA non-coding upstream 234524 33541460 ~ 33541666 (+)
G43395 NA non-coding upstream 256121 33519863 ~ 33520069 (+)
LOC120557846 samd3,LOC101476819 non-coding downstream 7936 33784327 ~ 33785135 (+)
G43452 NA non-coding downstream 91189 33867580 ~ 33868547 (+)
G43474 NA non-coding downstream 179566 33955957 ~ 33956156 (+)
G43512 NA non-coding downstream 294479 34070870 ~ 34071072 (+)
G43514 NA non-coding downstream 299480 34075871 ~ 34147068 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 430384 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 439423 33262195 ~ 33336767 (+)
G43277 NA other upstream 563872 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 734879 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 1304585 32470795 ~ 32471605 (+)
G43656 NA other downstream 888845 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 1687381 35463772 ~ 35486235 (+)
G43924 NA other downstream 1887752 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 2186148 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 2926864 36703255 ~ 36711295 (+)

Expression


Co-expression Network