rspo4 (LOC103374720,LOC103367962)


Basic Information

Item Value
gene id rspo4
gene name LOC103374720,LOC103367962
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 32380682 ~ 32444324 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796522.1
aattactccacctccaacctgaagaagcatcttaaaTGCTCGCAGATGTCCACAGCCTGGCGCTGAAGCGGGCGCTTGCCAGCAGCCCAGATGCATTTGCGACTCGTTGCCATTGTGATGTCCTTCCTATGCGAGGTGATCAAAATGGGGTCCGGCGTGGTGCAGAAGCAAAGCGCTCACAGAGAGACATCGGAGGAATGTCGGAGCTGCCTGGAGTGTTCCCGTGACAACGGCTGTGTGCGTTGCCCCGAGCGACTCTTCCTGTTCCTGCAGAGGGAGGGGATGTCTCACCATGGAACTTGTCTCCACGCCTGCCCCGCTGGACACTACGGACAGAGAGGGAAGGACATCAGCCGCTGCATGAAGTGTCGCTCTTCGGACTGTGAGCACTGTTTCAGCCGGGACTTCTGCACCAAGTGTAAGCCCAACTTCCAGCTGTACAAAGGCAAGTGTCTGACCCGCTGCCCAGGAGGAACCTTCGCCCACCAGACAGACTGCGTCGAGGACTGTCTCCTGGCTCCGTTGGGAGAGTGGAGCGACTGGAGCGTCTGTCTCCGTGACGGCGTCCCCTGCGGCTTCAGGTGGGGCAAGCAGACCAGGACCCGGGGGAGCGGGCAGTCCGGGAGAGCGCTGGAAGAGAAAGCGGCATCATTTTGCCCATCCCACAGCGAGACACAGAGGTGCAGGATGAAGAAAAAGTGTCCTACAGAAAGAAGAACGAATAAAAAAGGAGGATTtggaaggaaggagagaaaacaacagCCGCTCGCCAACGACAACGTCGGCAACTCGCCGAACGGAACCGCAGACGGCGCCGGCGAGCACGAGGGTCAATGGAGGGACGAGACGGACGCACAGCTCAACGCCACAGCTCAACGCCACACCTGACGCGTGTCGGCCGACGTCAGCGGGAGCTTTGTAACCTGAGGGCGCGTCAGTGTTTCTGTTCAGCCTGTACAATCtttgttaacacacacactgccactcACCACAATCTTGTTGAGAACAAATAAGTCGATAATATGACTAAGAAATACttaggctatgttcacacttggcgtcttttttgacacgaaaaagttgactagggcgcttttgtagtaa

Function

NR:

description
PREDICTED: R-spondin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796522.1 True 1104 mRNA 0.56 6 32380682 32444324

Neighbor

gene id symbol gene type direction distance location
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding upstream 963190 31377980 ~ 31417492 (+)
LOC120558103 slc6a6,LOC103364884 coding upstream 1507176 30821681 ~ 30873506 (+)
lsm3 lsm3,LOC100705055 coding upstream 1695147 30679316 ~ 30685535 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding upstream 1867194 30504694 ~ 30513488 (+)
tomm34 tomm34,LOC102784590 coding upstream 1937683 30429007 ~ 30442999 (+)
ripor3 LOC100693168,LOC104944097 coding downstream 203275 32647599 ~ 32730753 (+)
psmf1 psmf1 coding downstream 375646 32819970 ~ 32834491 (+)
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding downstream 557779 33002103 ~ 33033297 (+)
LOC120557808 NA coding downstream 902467 33346791 ~ 33348566 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding downstream 907044 33351368 ~ 33351936 (+)
G43037 NA non-coding upstream 27122 32353086 ~ 32353560 (+)
LOC120558237 NA non-coding upstream 592810 31781477 ~ 31787872 (+)
G42989 NA non-coding upstream 619251 31698778 ~ 31761431 (+)
G42986 NA non-coding upstream 743745 31635978 ~ 31636937 (+)
LOC120556663 NA non-coding upstream 811073 31565448 ~ 31569609 (+)
G43044 NA non-coding downstream 15340 32459664 ~ 32459875 (+)
G43046 NA non-coding downstream 17715 32462039 ~ 32462312 (+)
G43047 NA non-coding downstream 20435 32464759 ~ 32466215 (+)
G43048 NA non-coding downstream 23182 32467506 ~ 32467810 (+)
G43049 NA non-coding downstream 24523 32468847 ~ 32469083 (+)
ergic3 ergic3,LOC102788871 other upstream 2244848 30109535 ~ 30135834 (+)
G42449 NA other upstream 3138429 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 4557422 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 5615945 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 5831883 26542507 ~ 26548799 (+)
G43045 NA other downstream 15808 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 26471 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 593610 33037934 ~ 33041311 (+)
G43277 NA other downstream 743414 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 817871 33262195 ~ 33336767 (+)

Expression


Co-expression Network