cand2 (LOC100694792,LOC102304752,LOC101484714,LOC108244949)


Basic Information

Item Value
gene id cand2
gene name LOC100694792,LOC102304752,LOC101484714,LOC108244949
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33002103 ~ 33033297 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797455.1
CCGGTGttacctctctctgtcccctccAGACTCGCCATGTTGTCGGTTTAAATCTGTTGCCCCAGTTTTCTCTTTTTAACCGTAGATTCACTTTTCATAGCGCCGCTGATTTACTGTCAAAGTACCAAGATGTCGAACGTGTCTTACTACATCTCCAACTTGTTGGAGAAAATGACATCAACTGACAAAGATTTTAGGTTCATGGCCACTAATGACCTGATGCTGGAGCTCCAGAAGGACAGCATTAAGCTGGACGAGGACAGCGAGAGGAAGGTGGTGACCATGCTGCTCAAACTGCTGGAGGACAAGAACGGGGAGGTGCAGAACCTGgctgtaaaatgcctGGCCCCTCTGGTGAGTAAGGTGAAGGAGCCTCAGGTGGAGACGATGGTGGACACGCTGTGTtccaacatgatgtcagacaaAGAGCAGCTGAGAGACATTTCCAGCATGGGACTGAAGACTGTGATCGCTGAGCTGCCGCTGTCTTCATCAGGTTTGAGCCTGACAGTCAGTGTGTGTAAGAAGATTACCTCCCAGCTGATTGGTGCCATGGGGAAACAAGAAGACGTCTCAGTTCAGTTGGAGGCCCTGGACATCTTGTCGGACATGTTGGGAAGGCTGAGTGGTGCCCTGGTCAGTTTTCACAGCTCTTTGCTCTCCAGTCTGCTCCCTCAGTTAACAAGCCCCAGGATGGCGGTCAGGAAGCGCTCCATTTTGGCTCTCGGCCACCTGGTGCCCTGCTGTAGCCCCGCCCTCTTCTCCCAGCTGACTGAACACCTGCTGACGGAGTTGGCCAAGGGCCCGCCCACTTCTATGACGAGGACGTACATCCAGTGCCTAGCAACCATCAGTCGTCAGGGCGGACATCGAGTCGgTGAACATTTAGAGAAGCTGATTCCGATGGTGGTGAAGTTTACCGGTGTGGAGGATGACGAGCTGAGAGAGTATTGTTTCCAGGCTTTTGAAGCCTTCATACGAAgGTGCCCAAAGGAGATGTCCCCCCATGTTGCCACAGTAACACAGCTTTGTCTCAAGTTCATGACCTTTGACCCAAACTACAACTACGATGATGAGGAGCAGCAGGAAGAAGACAGCATGGACGTAGAGGAAGGGCTGGATGaagAGTCGGACGATGAGTACAGCGACGACGACGACATGAGCTGGAAGGTGCGGCGCTCCTCCATCAAGTGTCTGGAGGCGTTGATCCACACTCGCCGGGACCTCCTGCTCTCCTTCTACTCCTCCATCTGCCCCGCTCTGCTGGCCCGCTTCAAGGAGCGCGAGGAGAACGTGAGGGCGGACGTCTTCGCTGCCTTTTCGACGCTGCTGAGACAAACGCGAGTGGGATCTGGTCACCACGGCAACGTCAAGGCCGGCTCAGACTCAGCGCTGAGCCGGGAGGAAGAGCCGGCCGTCGCCATGCTGGAGACACAGGTGCCGGTGATAGTGAAGACGCTCCACAGACAGCTGAAGGAGAAGAGCATTAAGTCTCGACAGGGCTGCTTCTGTTTGCTCACTGAGCTCTCTCACACGGTACCTGGAGCTCTGGAGCAGCACATACCTGCTCTAATACctgGCATCGTCTTCTCCCTGACAGACAagtccacctcctccaccaTGAGGATCGATGCTCTCTCCTTCTTCCacgtcctcctcctctcccaccCTCCTCAAGCCTTTCAGCCGCACATGCAGGTGCTGCTGCCTCCAGTGGTGGCGTGTGTAGAAGACACGTTCTATAAGATCACCTCGGAGGCTCTGCTGGTCGCCCAGCAGCTGGTCAGAGTGATGCGACCGCAGGGACAGAGCGCCACAGCCGGACGATTCGACCCTAAACCGTTTGTCAAAGAGGTGTTTTCTGCAACCCTGAAGAGGCTGAAGGCAACGGACATCGACCAGGAAGTGAAAGAGAGGGCTATTTCCTGTATGGGTCACATGGTGTGTCACCTTGGTGACCACCTGGGGGCGGAGCTACAAGGTGTTTTGGCAATCTTCCTGGAGAGGTTGAAGAATGAGATCACAAGACTGACAGCAGTTAGGACCATCACCCTCATCTCTGCGTCTCCATTAAAGATCAACTTGTCGTCCATCCTGCCAGAGACTCTGTCTGTGTTGGGATCGTTCTTGCGGAAGAACCAGCGAGCTCTGAAGCTCGGCACGCTGGCGTGTCTGACAGCGCTGGTCACGCATCATGCCGCCAGCATCAAGCCTGCCGCGCTGGAGCCCGTTCTGAGCGAGCTTCCTGCTCTGGTGGACGAGGGCGACATGCACGTATCacagGTATCCGTCACCTTGCTGACCTGCATGGCCAAATGGTGTCCCTCCTCTCTGGCTAAGATCAGCTCCTCCGTGCTGCCGGGAGTCTTCAGACTCGTCCACTCTCCACTGCTGCAGGGTGCAGCACTGGCAGCCATACTGGACTTCCTACAGGCACTGGTGCTGTCCAAAACCAGTAACCTGGGCTACAGTCAGTTGCTGAAGTCTCTcaccgatccgttccaccgctCCCAGTCTTCAGACAGCACCATCATCCACAGACAGTCGTACCAGTCTGTGGCTCGCTGTGTGGCCGCTctgtcctcctcctgctccaaaGAAACTCCAGCCACGGTGGCCGGCCTCATGCaggaggTGAAGAACCCTGGTTCTCCAGAGTCTGCCCGAGTCCTGGCTCTGTTGTGTCTGGGGGAGCTGGGGAGGAGCGGCAGCCTGGGGCGGAGTAAGGAGGTGCAGGGAGTCATCCTGGAGGCCATCTCCTCCACCAATGAGGAGGTGAAGACGGCAGCATCCTGCGCTTTAGGCAGCATGGCGGTCGGCAGCCTGGACGAATACCTGCCCTTCCTGCTGAAAGAGATCTCGGCCCAGCCGCGGAGACAATACCTGCTGCTGCACTCCCTCAAAGAGGTCATCAGTGCCTGTCCAGCCTCTAGTCTCTCGGCCCATGTGGAGTCTATCTGGGCCTTGCTGTTCGACAACTGTGAGTGTCAGGAGGAGGGGACCAGGAACCTGGTGGCTGAATGTCTGGGAAAACTGACTTTAGTCAACGCTGCCCAGCTGTTACCCCGGCTCAAACAGCTGCTTAGAGCCGGTTCTCCTCTGGCTCGCAGCACGGTGGTGACAGCTATCAAGTTCACTATTGTTGACCAACCTGCTCCCATAGACTCCCTGCTGAAAGAGTGCATAGGAGACTTCCTGAAGACCCTGCAGGATGAGGACATCAACGTGCGGCGCGTCGCTTTGGTGATGTTTAACTCTGCAGCTCACAACAAACCATCTCTGATCCGTGGTCTCCTAGCAACAGTGCTGCCTCACCTCTACAAGGAGACCCAGATCCGGAAGGACCTCATCAGAGAAGTGGAGATGGGTCCATTCAAACACACTGTGGATGACGGGTTGGATGTGCGTAAAGCGGCATTTGAGTGTATGTACACTCTGCTGGACAGCTGCCTGGAGGGGCTGAACGTACTGCAGTTCCTAGATCATGTGGAGGAAGGACTCAAAGATCACTATGATATCAGGatGCTGACTTTCCTGATGTTGGCTCGACTGGCGTCTCTGTGTCCGGCAGCTGTTCTCCAAAGACTGGACAGACTGATAGAGCCTCTTAAAGCTACCTGCACTACCAAGGTGAAGGCCGGTTCTGTGAAGCAGGAGTTTGAGAAGCAGGAGGAGCTGCGGCGCTCGGCCATGCGCGCTGTCGCCGCGCTGCTGGCCGTGCCCGAGGTGGAGAGGAGCCCCAGCATGGCCGACTTCGCCAACCAGATCAGAACCAACGCTGACATGGCGTCAATCTACCAGAGCGtccagggaggggaggggggtggcTTAGGGTCAGCAGAGAGCATGGATATCAGCTAGACTCCCAGGTTTtggtttatatttttttagatAAAGGCCTTTTTTAAAGAAGCACAATGCTGTTCCACTTTCATACACAATCACAGCTGTATTTTGAAAACTGGGCTTTTTAGTATGAATTTCCTCTTtagcaaaataaattaaatgattgaCAGTT

Function

NR:

description
cullin-associated NEDD8-dissociated protein 1-like

GO: NA

KEGG:

id description
K17263 CAND1, TIP120A; cullin-associated NEDD8-dissociated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797455.1 True 4018 mRNA 0.55 24 33002103 33033297

Neighbor

gene id symbol gene type direction distance location
psmf1 psmf1 coding upstream 167612 32819970 ~ 32834491 (+)
ripor3 LOC100693168,LOC104944097 coding upstream 271350 32647599 ~ 32730753 (+)
rspo4 LOC103374720,LOC103367962 coding upstream 557779 32380682 ~ 32444324 (+)
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding upstream 1584611 31377980 ~ 31417492 (+)
LOC120558103 slc6a6,LOC103364884 coding upstream 2128597 30821681 ~ 30873506 (+)
LOC120557808 NA coding downstream 313494 33346791 ~ 33348566 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding downstream 318071 33351368 ~ 33351936 (+)
LOC120557839 LOC107671222,LOC106963510,LOC107723971 coding downstream 320109 33353406 ~ 33353823 (+)
LOC120557833 LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC101485372,LOC103379246 coding downstream 402230 33435527 ~ 33436108 (+)
LOC120557832 LOC106528837,LOC107102779 coding downstream 470501 33503798 ~ 33504308 (+)
G43195 LOC104931984,LOC102207393,LOC107384966,LOC102780474 non-coding upstream 35821 32962251 ~ 32966282 (+)
LOC120556764 NA non-coding upstream 90228 32909188 ~ 32911875 (+)
G43174 NA non-coding upstream 126489 32873143 ~ 32875614 (+)
G43135 NA non-coding upstream 151483 32850393 ~ 32850620 (+)
G43132 NA non-coding upstream 154197 32847551 ~ 32847906 (+)
LOC120557802 NA non-coding downstream 9811 33043108 ~ 33055383 (+)
G43330 NA non-coding downstream 304665 33337962 ~ 33338248 (+)
G43356 NA non-coding downstream 354884 33388181 ~ 33423815 (+)
G43395 NA non-coding downstream 486566 33519863 ~ 33520069 (+)
G43408 NA non-coding downstream 508163 33541460 ~ 33541666 (+)
G43051 LOC102201960 other upstream 530498 32470795 ~ 32471605 (+)
G43045 NA other upstream 541240 32460132 ~ 32460863 (+)
ergic3 ergic3,LOC102788871 other upstream 2866269 30109535 ~ 30135834 (+)
G42449 NA other upstream 3759850 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 5178843 27670963 ~ 27823260 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4637 33037934 ~ 33041311 (+)
G43277 NA other downstream 154441 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 228898 33262195 ~ 33336767 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other downstream 306987 33340284 ~ 33345806 (+)
G43656 NA other downstream 1631939 34665236 ~ 34667182 (+)

Expression


Co-expression Network