LOC120557808


Basic Information

Item Value
gene id LOC120557808
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33346791 ~ 33348566 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798430.1
TTAATATTTACGGTTCACACAAGTCACCTCCATCTAATATTATCCATCCCCAATAAGGATGAAACTGGGCGGTGCAAATCACATCCGGGAATTTCAGACCACAAGAACACAGATTGAGAAACAGACGAGCAGGTTATCCTTCAAACCAAACTAACAACTTCCTCTGAGTGAGTTCAGCTACAGTAGAGAAAAGTGTAATACTGCAACACTGCTGCTTCAACCTGCTGACACTCCACGCACTGAAGCTTCACTCAGAGACGAAATGGCTTCCAGATCAGTGGAGGATCTCTGCTGTCCGGTCTGTTACGACGTCTTTACAGATCCTGTTGTTCTGTCatgtagccacagcttctgtGAAGACTGTCTGCGGAGCTGGTGGACGGAGAAACAAACACGAGAGTGTCCACTTTGTAAGAAAAGATCTGCAGTGGACCCACCGTGTAACCTGGCCCTAAAGAACTTGTGTGAGGCCTTCTTACtggagagagatcagagagcttcagaggctctctgcagtctgcactcggagaaactcaaactcttctgtctggatCATCAGCAGCCGGTGTGTCTGGTCTGCAGAGATTCAGAAAAACACATCAACCACAGAATCAGACCCGTCGATGAAGCTGCACGACAACACAAGAAGAAACTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGCTTTTTGAACAAGTTAAGGTGAAGTGTGATCAAACAGCAGAACACATGAAGGTCCAGGCCCAATGCACAGAGACGCGGATCAAGGAGCGGTTTAAAAAGCTCCACTAGTTTCTAGAAGATGAAGAGGTGGCCAGGTTGGCTGCACTCTGGgacgaagaggagcagaagagcgagaggatgaaggagaagatggaggctctgagcagagagatagcagctctttcagacacagtcagagccacagaggagcagctgagagctgaagacATCTCATTCCTGCAGaactacaaggctgcagtggaaagagtccagcagcgccccccgctggatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacatgGTCTGCTACACTCCTGTGATTCTGGACCCAAACACAGCTTACCCAAACTTCATCCTGTCAGAAGATCTGACCAGTGTGAGACAAGGAGAGGAACAGCAGCTTCCTGataatccagagaggtttgataaATATGTCTGTgtcctgggctctgagggctttaactcagggactcacagctgggatgTTGAGGTTGGAGACAGTACATGCTGGTTTCtgggtgtgttagcagagtcCGGCCAGAGGAAGGGAGACATAGAGTCTGGATTATGGGGAACAGGGTACTATGAAGGCGAATATGTTGCACGATCATCATCAGATCACACTGAACTGGTAGTGCCAAAGAAGCTCCAGAGGATCAGAGTGACCCTGGACTGGAACAGAGGAAAGCTGTCGTTCTCTGATCCTGATActaacacagacatacacaccttcacacacactttcactgagagGATGTTTCCATTCATTAACATTGCTGATATAGTGAAGATATTACCggtgaaggtgtgtgtgacagtggaaCAGAGCAGATAGA

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798430.1 True 1646 mRNA 0.48 2 33346791 33348566

Neighbor

gene id symbol gene type direction distance location
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding upstream 313494 33002103 ~ 33033297 (+)
psmf1 psmf1 coding upstream 512300 32819970 ~ 32834491 (+)
ripor3 LOC100693168,LOC104944097 coding upstream 616038 32647599 ~ 32730753 (+)
rspo4 LOC103374720,LOC103367962 coding upstream 902467 32380682 ~ 32444324 (+)
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding upstream 1929299 31377980 ~ 31417492 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding downstream 2802 33351368 ~ 33351936 (+)
LOC120557839 LOC107671222,LOC106963510,LOC107723971 coding downstream 4840 33353406 ~ 33353823 (+)
LOC120557833 LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC101485372,LOC103379246 coding downstream 86961 33435527 ~ 33436108 (+)
LOC120557832 LOC106528837,LOC107102779 coding downstream 155232 33503798 ~ 33504308 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding downstream 168272 33516838 ~ 33518124 (+)
G43330 NA non-coding upstream 8543 33337962 ~ 33338248 (+)
LOC120557802 NA non-coding upstream 291408 33043108 ~ 33055383 (+)
G43195 LOC104931984,LOC102207393,LOC107384966,LOC102780474 non-coding upstream 380509 32962251 ~ 32966282 (+)
LOC120556764 NA non-coding upstream 434916 32909188 ~ 32911875 (+)
G43174 NA non-coding upstream 471177 32873143 ~ 32875614 (+)
G43356 NA non-coding downstream 39615 33388181 ~ 33423815 (+)
G43395 NA non-coding downstream 171297 33519863 ~ 33520069 (+)
G43408 NA non-coding downstream 192894 33541460 ~ 33541666 (+)
G43409 NA non-coding downstream 204809 33553375 ~ 33555178 (+)
G43412 NA non-coding downstream 210734 33559300 ~ 33563489 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 985 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 10024 33262195 ~ 33336767 (+)
G43277 NA other upstream 134473 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 305480 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 875186 32470795 ~ 32471605 (+)
G43656 NA other downstream 1316670 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 2115206 35463772 ~ 35486235 (+)
G43924 NA other downstream 2315577 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 2613973 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 3354689 36703255 ~ 36711295 (+)

Expression


Co-expression Network