G46816


Basic Information

Item Value
gene id G46816
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3516703 ~ 3517741 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62664
ggcctaggacgagttcgaaaaagttggttttgcacattgcgcgatattgcgaaaaaacgtttgcgcggaaatgggcgtggcctatatcaggtaattcagcttgattcacggaacacgtggatgtaaagatttctaatgtgcgatgtgtaatgtgggagttaaagccaaaaaaaacattacagcgaCACCTAGttgtccacatgtgtaatttttggtaggtgtggtccatggcccattgtccatctaccctgtaaatttaaagttgttcacattagtgtaagtggtgaatctagagTTGGGTCACATTGGGTcctataggccacgcccactttgatcCTCGGTTACTCCATTCTAGGGATGGCCTCAGGATTGCCCCCAGATGGTACGCATCAAATTTCgtataaatcggatgagccgttcatgagatataaactttttgtagttgtagcgccccctagtgaccaattttcgtaaaacgcatggggtacctccagagggtcatggcaaagaataatctaaagtttggcgttgatagcatttaatttggctgagatatggtaaagttggtgttttcatagttagctacacaaattagtttgtgcgtTATATGGGCAATTTTGATCGTACAAAAAttccttttataactttttgtcaggtcagtCTGGGGATGCTAGcttccaagtttcgtgcagatcggtcgcacagtctaggaggagttcgaaaaagtaggtttttgataaatccaATTTTTCACGCATTAAactctaggcggaaatgggcgtggcctatatcacgtgattcagttggatccagggaacgcgtggatgtatggtttttgaatgtagggtgtacggtgtgggagttatagggccaaacgggTTTTTGTCCACTATAGCACCACCTACTGGTGGAAATGGGTCGACTTTGGCGCCTTAGGTCCTTGCggggttttggaccagtcctgaaaatggcaaccccccactatgtacggtttaggctgcagtcagaattttaggcggagaagaagaagaagaagcgg

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP5-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62664 True 1039 lncRNA 0.44 1 3516703 3517741

Neighbor

gene id symbol gene type direction distance location
LOC120559410 NA coding downstream 57633 3458427 ~ 3459070 (-)
LOC120559390 NA coding downstream 90382 3383690 ~ 3426321 (-)
LOC120559411 NA coding downstream 176983 3331769 ~ 3339720 (-)
LOC120559400 NA coding downstream 263652 3251882 ~ 3253051 (-)
LOC120559395 NA coding downstream 324533 3185278 ~ 3192170 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding upstream 16338 3534079 ~ 3553937 (-)
LOC120559443 LOC103362253,LOC101473498 coding upstream 46768 3564509 ~ 3628773 (-)
trappc6b trappc6b coding upstream 217758 3735499 ~ 3745613 (-)
foxp3b NA coding upstream 253312 3771053 ~ 3809905 (-)
LOC120559452 suv39h1,LOC102791492 coding upstream 362569 3880310 ~ 3909770 (-)
LOC120559427 NA non-coding downstream 66515 3447209 ~ 3450188 (-)
G46856 NA non-coding downstream 358131 3157691 ~ 3158572 (-)
LOC120559426 NA non-coding downstream 386850 3121212 ~ 3129853 (-)
G46803 NA non-coding downstream 445303 3070176 ~ 3071400 (-)
LOC120559428 NA non-coding downstream 457249 3056573 ~ 3059454 (-)
G46920 NA non-coding upstream 696 3518437 ~ 3518669 (-)
G46979 NA non-coding upstream 186280 3704021 ~ 3704389 (-)
G46995 NA non-coding upstream 313018 3830759 ~ 3831182 (-)
G46999 NA non-coding upstream 325407 3843148 ~ 3843663 (-)
G47001 LOC101475032,LOC100694027,LOC104957049,LOC104932793 non-coding upstream 344867 3862608 ~ 3865304 (-)
LOC120559401 NA other downstream 22740 3491004 ~ 3493963 (-)
G46817 NA other downstream 230780 3283041 ~ 3285923 (-)
G46698 NA other downstream 1169199 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1181002 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2271475 1236385 ~ 1245228 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 416770 3934511 ~ 3950171 (-)
G47058 NA other upstream 437285 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 437863 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 1073706 4591447 ~ 4621836 (-)
G47252 NA other upstream 1212760 4730501 ~ 4731141 (-)

Expression


Co-expression Network