G46817


Basic Information

Item Value
gene id G46817
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3283041 ~ 3285923 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62665
ctcagaacagcatggatggatttttttcaaagtttgtatgtgtggaagcaccagagacacaaaagaacaccccaaatcccagaaaaagtgatttttttcataatatgggcactttaatcaTTTTGGTATCACTGATCATATTACCTTGGAACATAGCAATGCACAAGTgagtttttatagttttatacaGATCATAATATGTCCATCTCAGCTTTGCTTCAAAGAGAAAACTCCTCCGCTCCCTGACAGGGAACACCTTGCTAGGCTAACTTCCCTATGCTACCTCCCTCAAAACTCCCTTTTTTAAACTAAAGATAGCTTTCAACctgcacttcctgtctccctgacacagagagaaaagtcTCCTCTTAAACATAAtacacaaaattaaaacatcAACCCAATGTGTATTGAATAAACTCCCATATTGATACATGATTAATAGTGAATCTTGCTAAACATACGTTACTTAGAAAAAAGTGAATATATGTGTGGGCCCTATAAAATACTGGGTGACAGATTTCTTGATTAAAATTGATTATATGACAGACATTACAAGACAAACCAATatctaataaaacatttaaaataagagTATTCCTTTTCCTACCACACAATATAATGTCTTCTATCTAGATATTTTCTAGAATATTTTTGTTTGacacttgagaagttttgcttggactTAAAGGCACAAACATTATTCCATGTCACCAccctcaggttcagaagagtctccagtctggtcttcagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcttccacagtcctctccatcagcttctgtttccatcggaccaacacatttatgtgttttgacatcagaacgccagatttcttacagattgaacagctgaaaggtttttctccagaATGAGTCATCATGTGGTTCTTCAGGGTTCCACGTTGAGTGAAAGCTctaccacactcagagcagctaaaagatttttctcctgtgtgagttttcATGTGTGACCGTAAACTTCCTTTCCGTGTAAAAGATGcattacaaactgagcagctaaaaggtttttctcctgtgtggattctcatgtgtgaccgtaaagtttcactctgtgtaaaagatgtattacactcagagcagctaaaaggtttctctcctgtgtggattctcatgtgtttttttaaacttccactctgtgtaaaagatttcttacaaactaaacagctgaaagctttttctcctgtgtgagttatcatgtgtctcttcagggTTCCACTATCAGTGAAAGCtttaccacactcagagcagctaaaatGCTTCTCTCCTGtttggattctcatgtgtttttgtaaatatcgactgtgtgtaaaatacttcttacaaactgagcagctaaaaggtttttctcctgtgtggattatcatgtgtctcttcagacATGACTTGAAgccaaatcttttcccacactcagagcagctgaatgttttcttacatcttgaatcatgttttaGAGCATTTAAAGCTGACTggggttctctggtctccttccaattagcactgtcatcagtctcaggttcagaagagtctccagtctggtcttcagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcctccacaaacctctccatcagcttctgtttccatctgACCAACACATGTATGTGTTTTGACATCAGAACGccaggcaaatcttttgttacaaacactgcagctgaatcttttctctcctgtgtggactgccATGTGTGACAGTACAtttcctctctgtgtaaaagatttcttacagactgagcagctgaaaggtttttctccagaATGAGTCATCATGTGGTTCTTCAGGGTTCCACGTTGAGTGAAAGCTCTACCACACTCACAGCAGCTAAAAgatttttctcctgtgtgagttttcatgtgtgaccgtaaacttcctttctgtgtaaaagatttattacaaactgagcagctaaaaggtttttctcctgtgtggattctcatgtgtgacTGTAAATTCTGACTctgtgtaaaaaatgtattacactcagagcagctaaaaggtttctctcctgtgtggattctcatgtgtttttttaaacttccactctgtgtaaaagatttcttacagactgaacagctgaaaggtttttctcctgtgtgagttatcaTGTGGTTCTTCAGTTTTCCACTATCAGTGAAAGCTTtgccacactcagagcagctgaaaggattttctcctgtgtgagatCTCAGGTGTCTCTTCAGATTTGACTTGCGgccaaatcttttcccacactcagagcagctgattGTTTTCTTACgtcttgaatcatgtttcagagagtttaaagctgactgagattctctggtctccttccaatcagcactcacatcagtctcaggttcagaagagtctccagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcctccacagtcctctccatcagtttctgtttccatgtgttgagtttgtctttgatgaagctgtgaggactgagcttccgcttcatcatcttcactcttcacagggacaggagtgaatgggaacttggtgatatcagcctcctccagcccttgaagctgctctccctcctgactgctccacagttcctcctgttcctctttaatgtgtggggggggctctggctcctgctggtccacactggagctacactcctgctgctcagagGGAACCCAATCTTTAACCACTGACAGCT

Function

GO: NA

KEGG:

id description
ko03420 Nucleotide excision repair
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU62665 True 2792 TUCP 0.41 2 3283041 3285923

Neighbor

gene id symbol gene type direction distance location
LOC120559400 NA coding downstream 29990 3251882 ~ 3253051 (-)
LOC120558537 NA coding downstream 63258 2859280 ~ 3219783 (-)
LOC120559395 NA coding downstream 90871 3185278 ~ 3192170 (-)
LOC120559391 NA coding downstream 105187 3173356 ~ 3177854 (-)
LOC120559388 NA coding downstream 215826 3059497 ~ 3067215 (-)
LOC120559411 NA coding upstream 45846 3331769 ~ 3339720 (-)
LOC120559390 NA coding upstream 97767 3383690 ~ 3426321 (-)
LOC120559410 NA coding upstream 172504 3458427 ~ 3459070 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding upstream 248156 3534079 ~ 3553937 (-)
LOC120559443 LOC103362253,LOC101473498 coding upstream 278586 3564509 ~ 3628773 (-)
G46856 NA non-coding downstream 124469 3157691 ~ 3158572 (-)
LOC120559426 NA non-coding downstream 153188 3121212 ~ 3129853 (-)
G46803 NA non-coding downstream 211641 3070176 ~ 3071400 (-)
LOC120559428 NA non-coding downstream 223587 3056573 ~ 3059454 (-)
trnaq-cug_3 NA non-coding downstream 338117 2944853 ~ 2944924 (-)
LOC120559427 NA non-coding upstream 161286 3447209 ~ 3450188 (-)
G46816 NA non-coding upstream 230780 3516703 ~ 3517741 (-)
G46920 NA non-coding upstream 232514 3518437 ~ 3518669 (-)
G46979 NA non-coding upstream 418098 3704021 ~ 3704389 (-)
G46995 NA non-coding upstream 544836 3830759 ~ 3831182 (-)
G46698 NA other downstream 935537 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 947340 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2037813 1236385 ~ 1245228 (-)
G46199 NA other downstream 2300930 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 2344839 933032 ~ 938202 (-)
LOC120559401 NA other upstream 205081 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 648588 3934511 ~ 3950171 (-)
G47058 NA other upstream 669103 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 669681 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 1305524 4591447 ~ 4621836 (-)

Expression


Co-expression Network