G47004


Basic Information

Item Value
gene id G47004
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3873551 ~ 3873769 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62881
ggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatcccccctgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagaccgg

Function

NR:

description
PREDICTED: aryl hydrocarbon receptor nuclear translocator-like protein 1

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0007420 brain development biological_process
GO:0030902 hindbrain development biological_process
GO:0060322 head development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62881 True 219 lncRNA 0.48 1 3873551 3873769

Neighbor

gene id symbol gene type direction distance location
foxp3b NA coding downstream 63646 3771053 ~ 3809905 (-)
trappc6b trappc6b coding downstream 127938 3735499 ~ 3745613 (-)
LOC120559443 LOC103362253,LOC101473498 coding downstream 244778 3564509 ~ 3628773 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding downstream 319614 3534079 ~ 3553937 (-)
LOC120559410 NA coding downstream 414481 3458427 ~ 3459070 (-)
LOC120559452 suv39h1,LOC102791492 coding upstream 6541 3880310 ~ 3909770 (-)
si:dkey-16n15.6 LOC103362245 coding upstream 40224 3913993 ~ 3928156 (-)
LOC120558369 NA coding upstream 78532 3952301 ~ 3954770 (-)
asxl1 LOC102292987,LOC107098928 coding upstream 109504 3983273 ~ 4005648 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding upstream 409419 4283188 ~ 4381061 (-)
G47002 NA non-coding downstream 7755 3865355 ~ 3865796 (-)
G47001 LOC101475032,LOC100694027,LOC104957049,LOC104932793 non-coding downstream 8247 3862608 ~ 3865304 (-)
G46999 NA non-coding downstream 29888 3843148 ~ 3843663 (-)
G46995 NA non-coding downstream 42369 3830759 ~ 3831182 (-)
G46979 NA non-coding downstream 169162 3704021 ~ 3704389 (-)
G47005 NA non-coding upstream 2431 3876200 ~ 3877357 (-)
G47033 NA non-coding upstream 5303 3879072 ~ 3926019 (-)
G47042 NA non-coding upstream 55370 3929139 ~ 3929439 (-)
G47043 NA non-coding upstream 56541 3930310 ~ 3930663 (-)
G47083 NA non-coding upstream 93007 3966776 ~ 3969129 (-)
LOC120559401 NA other downstream 379588 3491004 ~ 3493963 (-)
G46817 NA other downstream 587628 3283041 ~ 3285923 (-)
G46698 NA other downstream 1526047 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1537850 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2628323 1236385 ~ 1245228 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 60742 3934511 ~ 3950171 (-)
G47058 NA other upstream 81257 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 81835 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 717678 4591447 ~ 4621836 (-)
G47252 NA other upstream 856732 4730501 ~ 4731141 (-)

Expression


Co-expression Network