G47005


Basic Information

Item Value
gene id G47005
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3876200 ~ 3877357 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62882
ctcctatgaggattttaaaatgaatgtcatATCGTCTGTAACATAGgtgatggtggaatctacacatctcagttctccagcggcagccacctgttgtaaacaaattcaacccaagcgttctttggtgacgtgattgattctgttactgGTGATCATCTGttcgacaatctgattggtccgaacagatcctgttcgggcaataattgcttctcaatggagcgactccagaccaaacttcccgacctcgaattttgtgggcggggctaagttcggctggcatccaggctacataaccactgaaaactgtcaaaaaatctaaccagaaatgtggtgattgatcgttgttttggtacattaaaccacattaagctttttcatgttaggacttataaagcccatgagaaccgttgggagtcaacccacagctgctccactgccctgctgaaaatgtgaagcagaaacgcctcagatgtcagataacggccataataattggactttgggtttgattttctgacagttttcagtggttatgaggagcaatatgagagagaaatttggtaatcattgatcattgtttacgcacattaaaccacgtttttattcattagtaagctacaggatagcgtctttcaaacatgacctgcgcgaaagagaaaaaataaataaaatgcgtcattgtacccagcacttctagaaatgtacttccaaatgcgtctctgtccaccacatttcaaaccaaactgacgcccatggATTTACCCATGACTCAATCTGGAAAATAATTCGATTTTGTATTTTTGACCCTCTGAATTTACCGTTGGATACGCCTAGGCATGATACGGGACAGCTTAggacgctccaggctgcagccatacccgcctCCACTAGACTAgagagtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagactaTAAATGCAGCGCGTGTGAGAGCAAACCGTCCTTATAGCTTATTAGACTGATCACCCCCGAAATTGTGCAATGCAAAACAGGCTCATTGCAGCCACTAATGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62882 True 1158 lncRNA 0.44 1 3876200 3877357

Neighbor

gene id symbol gene type direction distance location
foxp3b NA coding downstream 66295 3771053 ~ 3809905 (-)
trappc6b trappc6b coding downstream 130587 3735499 ~ 3745613 (-)
LOC120559443 LOC103362253,LOC101473498 coding downstream 247427 3564509 ~ 3628773 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding downstream 322263 3534079 ~ 3553937 (-)
LOC120559410 NA coding downstream 417130 3458427 ~ 3459070 (-)
LOC120559452 suv39h1,LOC102791492 coding upstream 2953 3880310 ~ 3909770 (-)
si:dkey-16n15.6 LOC103362245 coding upstream 36636 3913993 ~ 3928156 (-)
LOC120558369 NA coding upstream 74944 3952301 ~ 3954770 (-)
asxl1 LOC102292987,LOC107098928 coding upstream 105916 3983273 ~ 4005648 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding upstream 405831 4283188 ~ 4381061 (-)
G47004 NA non-coding downstream 2431 3873551 ~ 3873769 (-)
G47002 NA non-coding downstream 10404 3865355 ~ 3865796 (-)
G47001 LOC101475032,LOC100694027,LOC104957049,LOC104932793 non-coding downstream 10896 3862608 ~ 3865304 (-)
G46999 NA non-coding downstream 32537 3843148 ~ 3843663 (-)
G46995 NA non-coding downstream 45018 3830759 ~ 3831182 (-)
G47033 NA non-coding upstream 1715 3879072 ~ 3926019 (-)
G47042 NA non-coding upstream 51782 3929139 ~ 3929439 (-)
G47043 NA non-coding upstream 52953 3930310 ~ 3930663 (-)
G47083 NA non-coding upstream 89419 3966776 ~ 3969129 (-)
G47091 NA non-coding upstream 103820 3981177 ~ 4012698 (-)
LOC120559401 NA other downstream 382237 3491004 ~ 3493963 (-)
G46817 NA other downstream 590277 3283041 ~ 3285923 (-)
G46698 NA other downstream 1528696 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1540499 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2630972 1236385 ~ 1245228 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 57154 3934511 ~ 3950171 (-)
G47058 NA other upstream 77669 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 78247 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 714090 4591447 ~ 4621836 (-)
G47252 NA other upstream 853144 4730501 ~ 4731141 (-)

Expression


Co-expression Network