G47042


Basic Information

Item Value
gene id G47042
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3929139 ~ 3929439 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62928
tgcgtggacatttttgcctcgaaggtgtccagagggtacaaaatgaatcatttaagtataaaagacatgtaagagtaaaaaacactggatttaaaaaaattgactgaaaagaaggattcctacaaaatgtcatgccataagaagtaacacagcaaaaatgatcacaaaatgaaaaaaaaaaaacttgagaaaaatgtacaaaaatgaccgaagagggcatgagggttaagtcattttctggtaagatacttgtacttttactcaagtattgctttcaagtactttatacaagaacTCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62928 True 301 lncRNA 0.33 1 3929139 3929439

Neighbor

gene id symbol gene type direction distance location
si:dkey-16n15.6 LOC103362245 coding downstream 983 3913993 ~ 3928156 (-)
LOC120559452 suv39h1,LOC102791492 coding downstream 19369 3880310 ~ 3909770 (-)
foxp3b NA coding downstream 119234 3771053 ~ 3809905 (-)
trappc6b trappc6b coding downstream 183526 3735499 ~ 3745613 (-)
LOC120559443 LOC103362253,LOC101473498 coding downstream 300366 3564509 ~ 3628773 (-)
LOC120558369 NA coding upstream 22862 3952301 ~ 3954770 (-)
asxl1 LOC102292987,LOC107098928 coding upstream 53834 3983273 ~ 4005648 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding upstream 353749 4283188 ~ 4381061 (-)
efhd2 efhd2,LOC102781412 coding upstream 748261 4677700 ~ 4705540 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 1277783 5207222 ~ 5218713 (-)
G47033 NA non-coding downstream 3120 3879072 ~ 3926019 (-)
G47005 NA non-coding downstream 51782 3876200 ~ 3877357 (-)
G47004 NA non-coding downstream 55370 3873551 ~ 3873769 (-)
G47002 NA non-coding downstream 63343 3865355 ~ 3865796 (-)
G47001 LOC101475032,LOC100694027,LOC104957049,LOC104932793 non-coding downstream 63835 3862608 ~ 3865304 (-)
G47043 NA non-coding upstream 871 3930310 ~ 3930663 (-)
G47083 NA non-coding upstream 37337 3966776 ~ 3969129 (-)
G47091 NA non-coding upstream 51738 3981177 ~ 4012698 (-)
G47092 NA non-coding upstream 121071 4050510 ~ 4059713 (-)
G47093 mfn2,LOC102789666 non-coding upstream 123278 4052717 ~ 4055342 (-)
LOC120559401 NA other downstream 435176 3491004 ~ 3493963 (-)
G46817 NA other downstream 643216 3283041 ~ 3285923 (-)
G46698 NA other downstream 1581635 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1593438 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2683911 1236385 ~ 1245228 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 5072 3934511 ~ 3950171 (-)
G47058 NA other upstream 25587 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 26165 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 662008 4591447 ~ 4621836 (-)
G47252 NA other upstream 801062 4730501 ~ 4731141 (-)

Expression


Co-expression Network