LOC120559679 (LOC103384848,LOC102790723,LOC100693496)


Basic Information

Item Value
gene id LOC120559679
gene name LOC103384848,LOC102790723,LOC100693496
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3934511 ~ 3950171 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62952
TGAGAACGAAGATATCATTGGTTGTAGACTTAGTCCCAGGCCATCTTGGAATGAACTTTGATGATTTTGATTGCGTTGACCATGGGAGTCTCTTGAGAAGATCTGCTAGACCCAGCACAGGCTGTCTGTCACAGGCCAGCCTAGAGCGGGATCTAtacttctgcgtaaaatctacgCTGTTGCTACGTAcataggtacgtggagacacaaacctacgccgtagcctgacgtgcacctctcgaaaaatgtaactacatgttagggctgggtacccaattcaatactttttaggcaccgaccgaattgcctctaaagcaTCGattatcgaaaaatgcctcgtcattcaataccctatttcaatacctaagtagtaaatctcatcagcgtcagggagccaataagcacacagcatgtttctacctaataatgtctgtgattggctgtttaacgttacacatcgtagagacacgcaggaaaaactgtaatttcctttttgtttcataaaattggtattgaaaaaaggAACGTTTAGGAACCGGTGTCAAAGTCACAGTATTTGTATCCgtactgaaatgtttttttaacgatacccagccctaactgcacgtcgctcggccgtggcttggtagcgttgcatttcccagTTCTACGTAAACGTGAGATAAAGgcgagggttaacttttcccgctacagatttcccaccgtggttcagaaagaacaggggagacacttctCACTACGACTCtggagtcactactcgctccgaagctaatcgctgtCACTCCCTCACTTTCTCCCTCGGTCTACCAcgcactccacacacacacctgccggctcgacgcacacaccaacgcacaagaataaacatcaggccacttaacGTAGGCTACgccgaaagctctgcgtggagcctccgcaggaccATAAATCACCCTTAACTGTCTACAGACAGCATGTCCCTGTAGGATTGGGTCCGTTGTAATGTTGGTGTTGGATAATGTCCCGAAACATTTCAGCAGTTTAGCATGCCTCGACACATTTTTTAAAGGGCCCATAACTGTAATTATTcataag
>XM_039801593.1
agaaggaggagaagaagaagaagaagcagtatcatcatcatcatcatcatctgtgtCTGTGGTATAGCATGACTTTGCAGTGAGCTGCCGCCTCTTCTACCCCGCCCCCCCGagcatggACCTGTCCCAGCGGTTGCAGGTGTGGCAGCAGCTGGCAGCCAGCTGTGGGCTGAGCACGGTGCAGCAGGGCGTCCAGCAGCTGtggaggctgctgctgctctgcctcgTCTGCAGACTCTTCTTCAGACTGGGAGGCGTGTCCACTGTGAAGCATGTGGTGTCCGTGCTGGCCGGGATGTGCGCCCTCTTCCTGTTCTTTGAGCAGCACATGCTGTGGGTGCTGCTGCTCAGTGCGCTGTGTTACCTGGCTCTGCTCCTCAGCCCACGCTCCGGCAGCAGGGGCCTCTTCCTCTCGGCTCTCATCCTCGCCTACCTGCTGGTTGGAGAGTTGCATTTAATTGACATGGTGACCTGGCATAAAATAAGAGgctcTCAGATGGTGGTGGCCATGAAGGCCATCTCTCTAGCCTTTGACCTGGACAGAGGCGCGGTGGGCAGCCTGCCCTCCCCAGCTGAGTTCCTGGGCTATGTTCTCTTTGTGGGCACAGTTGTCTTCGGTCCTTGGATCAGCTTCTCCACTTATAAGAACGCCGTTGAGGGCAAAAAGCTGAGCTGGGCGTGGCTGCGCGGCTCCTCCCTCAGCCTCCTGAAGAGCCAGATCTGTCTGGTGGTCTCCACCTGCGTGGCCCCGTACCTCTTCCCTTTGGTAATCCCCATCCACGGAAACACAGTCCCACAGAAGTGGCTGCGTGCGTATGAGAATGCGGTGTCCTTCCACTTCAGTAACTACTTTGTGGGTCACCTGAGCGAAGGCACCAGCATGCTGGCTGGAGCCGGCTTCACGGAAGAAAAGGACCACGTCAAGTGGGATATGAGTGTGGTGAAGCCTCTCAGTGTGGAAATGCCTCGCTCCATGGTGCTGGTGGTGACGTCCTGGAACGTCCCCATGTCCCGATGGCTGAAAACCTATGCCTTTAAAAACGCCATGAAACTGGGGACTTTTCCAGCCATCCTGGTGACGTACACAGCCAGCGCCCTACTGCATGGTCTGAGCTTTCACCTGGGAGCTGTTCTGCTGTCTTTGGGCTTCATCACATATGTTGAACATGTTCTGAGAAAGAAGCTGGCCTGTGTGTTGAGTGCGTGTGTCCTGTCCAGGCCCTGCCCCCCCGACTGCAGCCACCAGCACAAGAAGGAGTATTGGGTGATGTTGCTGAACCTGGTTTTCAGCCTCCTGGCCATCTTCCACCTCACCTACCTGGGCTCCATGTTTGATCCCGGACTGGATGAACAGGAAGTGGAAGAGGGTTACACCGCCATCCACACCATCCGGAGGTGGTCCGAGCTGAACTGGGCCGGCCACTGGGTGGTGTTGGCCTGCTGGCTCTTCTACCGCCTGATTCAGTGACGTCGCCGGAGCCGTCGGGGAAAGGCTGGCCGACACCACAGGCTTCCCGACGCCATGTCAGGATGTTATCGGATGGGGGACCAAGGACCAGGACGTGCTCCAGCTGGAGGACTGCGTCtgtgctggggggggggggttggggttaATGTGTTAAGAAGAGATGGATGGTTGTAGAGTGAGAACGAAGATATCATTGGTTGTAGACTTAGTCCCAGGCCATCTTGGAATGAACTTTGATGATTTTGATTGCGTTGACCATGGGAGTCTCTTGAGAAGATCTGCTAGACCCAGCACAGGCTGTCTGTCACAGGCCAGCCTAGAGCGGGATCTAtacttctgcgtaaaatctacgCTGTTGCTACGTAcataggtacgtggagacacaaacctacgccgtagcctgacgtgcacctctcgaaaaatgtaactacatgttagggctgggtacccaat

Function

NR:

description
PREDICTED: protein-serine O-palmitoleoyltransferase porcupine-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K00181 PORCN; O-palmitoleoyl transferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU62952 False 1074 lncRNA 0.46 1 3934511 3935584
XM_039801593.1 True 1921 mRNA 0.56 14 3935308 3950171

Neighbor

gene id symbol gene type direction distance location
si:dkey-16n15.6 LOC103362245 coding downstream 6355 3913993 ~ 3928156 (-)
LOC120559452 suv39h1,LOC102791492 coding downstream 24741 3880310 ~ 3909770 (-)
foxp3b NA coding downstream 124606 3771053 ~ 3809905 (-)
trappc6b trappc6b coding downstream 188898 3735499 ~ 3745613 (-)
LOC120559443 LOC103362253,LOC101473498 coding downstream 305738 3564509 ~ 3628773 (-)
LOC120558369 NA coding upstream 2130 3952301 ~ 3954770 (-)
asxl1 LOC102292987,LOC107098928 coding upstream 33102 3983273 ~ 4005648 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding upstream 333017 4283188 ~ 4381061 (-)
efhd2 efhd2,LOC102781412 coding upstream 727529 4677700 ~ 4705540 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 1257051 5207222 ~ 5218713 (-)
G47043 NA non-coding downstream 3848 3930310 ~ 3930663 (-)
G47042 NA non-coding downstream 5072 3929139 ~ 3929439 (-)
G47033 NA non-coding downstream 8492 3879072 ~ 3926019 (-)
G47005 NA non-coding downstream 57154 3876200 ~ 3877357 (-)
G47004 NA non-coding downstream 60742 3873551 ~ 3873769 (-)
G47083 NA non-coding upstream 16605 3966776 ~ 3969129 (-)
G47091 NA non-coding upstream 31006 3981177 ~ 4012698 (-)
G47092 NA non-coding upstream 100339 4050510 ~ 4059713 (-)
G47093 mfn2,LOC102789666 non-coding upstream 102546 4052717 ~ 4055342 (-)
G47122 NA non-coding upstream 246617 4196788 ~ 4197049 (-)
LOC120559401 NA other downstream 440548 3491004 ~ 3493963 (-)
G46817 NA other downstream 648588 3283041 ~ 3285923 (-)
G46698 NA other downstream 1587007 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1598810 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 2689283 1236385 ~ 1245228 (-)
G47058 NA other upstream 4855 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 5433 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 641276 4591447 ~ 4621836 (-)
G47252 NA other upstream 780330 4730501 ~ 4731141 (-)
G47254 NA other upstream 782625 4732796 ~ 4733285 (-)

Expression


Co-expression Network