G47254


Basic Information

Item Value
gene id G47254
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4732796 ~ 4733285 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63181
gtaaacacttcactactagatatgatcaatatgtccttattaacaggttatgtaccgcagtcatttaaagtagcagtgataaaacctcttctgaaaaaaaccaccctagatcctgaggtcttagcaaactatagacctatatctaaccttccctttctatccaagatccttgagaaggtggttgctaatcagttatgtgattttctacatagcaacagtttatttgatgattttcaatcaggatttagaaagaatcatagcacagagacggcactggtgaaaattactaacgaccttctaacagctgcagacaaaggacttgtctccattcttgttttactagatcttagtgctgcatttgacactattgaccataccatcctgttacagagactggaacacttagttggcattaaaggaatcgcactaagctggttcaagtcctatttctctgagcgatcccaatttgttaacattaacgataaaccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63181 True 490 TUCP 0.38 1 4732796 4733285

Neighbor

gene id symbol gene type direction distance location
efhd2 efhd2,LOC102781412 coding downstream 27256 4677700 ~ 4705540 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding downstream 351735 4283188 ~ 4381061 (-)
asxl1 LOC102292987,LOC107098928 coding downstream 727148 3983273 ~ 4005648 (-)
LOC120558369 NA coding downstream 778026 3952301 ~ 3954770 (-)
si:dkey-16n15.6 LOC103362245 coding downstream 804640 3913993 ~ 3928156 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 473937 5207222 ~ 5218713 (-)
LOC120559579 LOC103144399 coding upstream 1005036 5738321 ~ 5741953 (-)
tcea2 LOC103367858,LOC108232081 coding upstream 1673078 6406363 ~ 6427923 (-)
LOC120558793 NA coding upstream 2083422 6816707 ~ 6823536 (-)
LOC120558600 NA coding upstream 2094400 6827685 ~ 6838050 (-)
G47251 NA non-coding downstream 4687 4727833 ~ 4728109 (-)
LOC120559128 NA non-coding downstream 22389 4709392 ~ 4710407 (-)
LOC120559758 NA non-coding downstream 92654 4639093 ~ 4640142 (-)
LOC120559646 NA non-coding downstream 97356 4634314 ~ 4635440 (-)
LOC120558634 NA non-coding downstream 104273 4625963 ~ 4628523 (-)
G47297 NA non-coding upstream 118905 4852190 ~ 4852414 (-)
G47304 NA non-coding upstream 154664 4887949 ~ 4889652 (-)
G47305 NA non-coding upstream 154976 4888261 ~ 4895639 (-)
G47309 NA non-coding upstream 170727 4904012 ~ 4942146 (-)
G47312 NA non-coding upstream 240927 4974212 ~ 4974614 (-)
G47252 NA other downstream 1655 4730501 ~ 4731141 (-)
dedd dedd,LOC103374682 other downstream 110960 4591447 ~ 4621836 (-)
G47059 LOC102202574 other downstream 776414 3955604 ~ 3956382 (-)
G47058 NA other downstream 777267 3955026 ~ 3955529 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other downstream 782625 3934511 ~ 3950171 (-)
G47624 NA other upstream 1963160 6696445 ~ 6721729 (-)
G47638 NA other upstream 2070856 6804141 ~ 6805706 (-)
LOC120558602 NA other upstream 2221919 6955204 ~ 7036375 (-)
G47814 NA other upstream 2752142 7485427 ~ 7498802 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other upstream 3038651 7771936 ~ 8187551 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G414862 NA non-coding CI01000300 null 10761742 ~ 10762001 (+)
rainbow trout (Oncorhynchus mykiss) G420465 NA non-coding NC_048569.1 CM023223.2 58477182 ~ 58477405 (+)
striped catfish (Pangasianodon hypophthalmus) G401531 NA non-coding NC_047623.1 CM018569.1 6748993 ~ 6749232 (-)