G47309


Basic Information

Item Value
gene id G47309
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4904012 ~ 4942146 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63246
ccttggtctctgtctgtctgtctggtctctgtcctctggtctctgtcctctggtctttGTCTTCTGGTccctgtcctggtctctgtctgtctgtctggtctctgtcctctggtctctgtcctctgtcctctggtctctgtctggtctctggtctctgtcctctgtcctctgtcctctgtcctctgtcctctggtctctgtctgtctggtctctgtc
>TU63248
ctctggtctctgtctgtctgtctggtctctgtcctctggtctctgtcctctggtctctgtcctctggtctctgtcctctggtctttGTCTTCTGGTccctgtcctggtctctgtctgtctgtctggtctctgtcctctggtctctgtcctctgtcctctggtctctgtctggtctctggtctctgtcctctgtcctctgtcctctggtctctgtctgtctggtctctgtcttctGGTCTCTGGTCTTTTCTTCTGGTccctgtcctggtctctgtcctggtctctgtcctctagtctctgtcctggtctctgtc
>TU63249
gtctggtctctgtcctctggtctctgtcctctgtcctctgtcctctggtctctgtctggtctctggtctctgtcctctgtcctctgtcctctggtctctgtctgtctggtctctgtcctctagtctctgtcctggtctctgtc
>TU63251
ctggtctctgtctgtctgtctggtctctgtcctctggtctctgtcctctgtcctctgtcctctggtctctgtctggtctctggtctctgtcctctgtcctctgtcctctggtctctgtctgtctggtctctgtcttctGGTCTCTGGTCTTTTCTTCTGGTccctgtcctggtctctgtcctggtctctgtcctctagtctctgtcctggtctctgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63246 False 216 lncRNA 0.56 3 4904012 4911010
TU63248 True 314 lncRNA 0.55 2 4904149 4942146
TU63249 False 143 lncRNA 0.56 3 4904149 4909840
TU63251 False 218 lncRNA 0.55 2 4904149 4908653

Neighbor

gene id symbol gene type direction distance location
efhd2 efhd2,LOC102781412 coding downstream 198472 4677700 ~ 4705540 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding downstream 522951 4283188 ~ 4381061 (-)
asxl1 LOC102292987,LOC107098928 coding downstream 898364 3983273 ~ 4005648 (-)
LOC120558369 NA coding downstream 949242 3952301 ~ 3954770 (-)
si:dkey-16n15.6 LOC103362245 coding downstream 975856 3913993 ~ 3928156 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 265076 5207222 ~ 5218713 (-)
LOC120559579 LOC103144399 coding upstream 796175 5738321 ~ 5741953 (-)
tcea2 LOC103367858,LOC108232081 coding upstream 1464217 6406363 ~ 6427923 (-)
LOC120558793 NA coding upstream 1874561 6816707 ~ 6823536 (-)
LOC120558600 NA coding upstream 1885539 6827685 ~ 6838050 (-)
G47305 NA non-coding downstream 8373 4888261 ~ 4895639 (-)
G47304 NA non-coding downstream 14360 4887949 ~ 4889652 (-)
G47297 NA non-coding downstream 51598 4852190 ~ 4852414 (-)
G47251 NA non-coding downstream 175903 4727833 ~ 4728109 (-)
LOC120559128 NA non-coding downstream 193605 4709392 ~ 4710407 (-)
G47312 NA non-coding upstream 32066 4974212 ~ 4974614 (-)
LOC120559817 NA non-coding upstream 111356 5053502 ~ 5056374 (-)
G47365 NA non-coding upstream 370831 5312977 ~ 5313285 (-)
G47370 NA non-coding upstream 413502 5355648 ~ 5356122 (-)
LOC120559615 NA non-coding upstream 415463 5357609 ~ 5358773 (-)
G47254 NA other downstream 170727 4732796 ~ 4733285 (-)
G47252 NA other downstream 172871 4730501 ~ 4731141 (-)
dedd dedd,LOC103374682 other downstream 282176 4591447 ~ 4621836 (-)
G47059 LOC102202574 other downstream 947630 3955604 ~ 3956382 (-)
G47058 NA other downstream 948483 3955026 ~ 3955529 (-)
G47624 NA other upstream 1754299 6696445 ~ 6721729 (-)
G47638 NA other upstream 1861995 6804141 ~ 6805706 (-)
LOC120558602 NA other upstream 2013058 6955204 ~ 7036375 (-)
G47814 NA other upstream 2543281 7485427 ~ 7498802 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other upstream 2829790 7771936 ~ 8187551 (-)

Expression


Co-expression Network