G47624


Basic Information

Item Value
gene id G47624
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6696445 ~ 6721729 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63619
GTACAAtcatcattttatttgtatgtatgaAATACATAGAAAAACACATGAGACAGTGGCATTTTCGTTTTCATTTTAGCAGCAGttatatgtttttaatttggcTGTGCATTTACTGTATGATACCCGGAAGAAACTGCATTCGTGTTTAATgagttaaattaaattaagagAGCTttggctttctctctctctctatctctctctctctgtctctctctttctctctgtctctctctatatatctctctatcttgctttcaatttaatttgctttattggaatcaacaaagaaaacatgttgttaccaaagcagtttacagaaaatgcatatatagtacatatcacatgttaaatacatacagtaggtgtcacaTAGATTCTATGCTGCACTGATCGTTATACAACACActacattacaaaacaattacacaaCTCAATATAATACTTAACAGTTTTGTACAATATAATTACTGTACGATACTAAACCAATGTGTAATGCTGGGATCTTATAGTGGTGAGTCCCTCAGGTTGTGGCAGGCAGATACATATTCAGCTGCCAGTGTGGAGCTGCTGTCCTTTCTCCTAGGAGAACGtccagcttctcttctcttaATATTGGGAAATTTGCTTTTTTGTGAGCTATTTTTCCAAAGTGTAAatccctttttttcacagtggaGGAGTCTTCCAGTCTCCACTGAGCCTGTATATagtcagtttctctctctctctctctctgtctctctctccttctctttctctccctctctctctctctctctttctgtgtcttcCTCTCTCAGCCCTGAGAAACTTGACATAACTGTATCAAAATGAACAGAGCATAAATCAAAAGACACAAGCAAAGTGATAGATCAACG

Function

NR:

description
heat shock factor-binding protein 1-like

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU63619 True 884 TUCP 0.37 2 6696445 6721729

Neighbor

gene id symbol gene type direction distance location
tcea2 LOC103367858,LOC108232081 coding downstream 268522 6406363 ~ 6427923 (-)
LOC120559579 LOC103144399 coding downstream 954492 5738321 ~ 5741953 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding downstream 1477732 5207222 ~ 5218713 (-)
efhd2 efhd2,LOC102781412 coding downstream 1990905 4677700 ~ 4705540 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding downstream 2315384 4283188 ~ 4381061 (-)
LOC120558793 NA coding upstream 94978 6816707 ~ 6823536 (-)
LOC120558600 NA coding upstream 105956 6827685 ~ 6838050 (-)
LOC120558601 NA coding upstream 124306 6846035 ~ 6848369 (-)
LOC120558623 NA coding upstream 574837 7296566 ~ 7299426 (-)
LOC120558800 NA coding upstream 598296 7320025 ~ 7359408 (-)
G47498 NA non-coding downstream 124321 6571892 ~ 6572124 (-)
G47485 NA non-coding downstream 322902 6366360 ~ 6373543 (-)
G47459 NA non-coding downstream 459607 6232908 ~ 6236838 (-)
G47447 NA non-coding downstream 554556 6118484 ~ 6141889 (-)
G47439 NA non-coding downstream 659947 6036255 ~ 6036498 (-)
G47641 NA non-coding upstream 104524 6826253 ~ 6827520 (-)
LOC120558809 NA non-coding upstream 328019 7049748 ~ 7270452 (-)
G47677 NA non-coding upstream 329585 7051314 ~ 7051795 (-)
G47693 NA non-coding upstream 458379 7180108 ~ 7266048 (-)
LOC120558811 NA non-coding upstream 493734 7215463 ~ 7218392 (-)
G47254 NA other downstream 1963160 4732796 ~ 4733285 (-)
G47252 NA other downstream 1965304 4730501 ~ 4731141 (-)
dedd dedd,LOC103374682 other downstream 2074609 4591447 ~ 4621836 (-)
G47059 LOC102202574 other downstream 2740063 3955604 ~ 3956382 (-)
G47058 NA other downstream 2740916 3955026 ~ 3955529 (-)
G47638 NA other upstream 82412 6804141 ~ 6805706 (-)
LOC120558602 NA other upstream 233475 6955204 ~ 7036375 (-)
G47814 NA other upstream 763698 7485427 ~ 7498802 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other upstream 1050207 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other upstream 1093422 7815151 ~ 7886850 (-)

Expression


Co-expression Network