G47846


Basic Information

Item Value
gene id G47846
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7603967 ~ 7605303 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63883
CGTGACTGAAGCCTCTCTGTTGCCATTGGTGACTAACGGTGCTCCAAAGATGACATCACGAACTAGATTCATTTCGCCGGTTATATTCTGTTGTATTGCTGTCCTGGGTGTGTCCCTGGTTGTTGAGAAATTGGACAGCGGCCAGGAGACAACGCCTCTCTCATGAATCCAGTCTTTCTGTTACTTCAGCTTCAGTTCCTCAGCCATAGAAGGAGAACTCCCCTGCCGCAAACAGTGACACCAATATGCACTGAGAATATATTGCTCTGTAAAATTGCAGCccaattgtaaatgttttaaaattgagATTTGAACTTGGCAGTAGGATGGAACAAATTGAGGTCTGCACTCCCACAAATCCACAGGACTGTTCGATCAATTTTATTGATGGTGTCTAATCACAACAGAAGTTGTCTCAGGACGCTTTACAAATAGagtgggtctagaccacactataatttacaaagacccaacaattcccccaggAGCATGGCTTTGGTGCAACAATGGCGAGGACAATCTTcctttaacaggcagaaacttTGGACAGAAACTGGCTCTGGTGTCACTACGTCTTTTACCGTGTGCCAGGGCAGACGTGTCTGTAGCTGTACTGCCTTCCACAGTGTGGCGGCAAAATGCACAATGTTCCAGCTTTTCAGCGTGTGCAGGCCTTACAGTCTAGGGTGCAGACATGTACATCCTTTCCCTTTTTTGACCGCCCTCATTGCATGATATGAGTAAGATGGTTACTTTCTCTGTAGAAAGTGCATTACATGATTAGTGTTTTGTGTATATACACTGGCTTGCAtaagtttacacacccatgctgAAGTTGACTAAAGGCCAGTTAtgtcatggatccaggatactatccatcctgatgaagttcccttggcctttggaattaaaataggcccccccatcatcacataccatccaccatacctagagattggcatggggtactttccataagataatctctcaatgcaaatcaaaccagctattaggatAACTGAAAtcaaaccatgccaatctctaggtatggtgaagggtatgtgatgatgtgggggggctattttaattccaacggccaagggaactttatcaggatgcatagtatcctggatccatgacataactggcctttaaaagtaaaaatctgcctgcctctatgggaatttaacatagggatgggtgtatacttatgccccctgtattttaaggaagaacatttatttatttacgataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63883 True 1256 lncRNA 0.44 2 7603967 7605303

Neighbor

gene id symbol gene type direction distance location
hsd17b10 hsd17b10 coding downstream 4193 7590901 ~ 7599774 (-)
LOC120558801 NA coding downstream 156118 7439183 ~ 7447849 (-)
LOC120558624 NA coding downstream 196289 7375726 ~ 7407678 (-)
LOC120558800 NA coding downstream 244559 7320025 ~ 7359408 (-)
LOC120558623 NA coding downstream 304541 7296566 ~ 7299426 (-)
fam120c fam120c coding upstream 7184 7612487 ~ 7632545 (-)
LOC120558669 LOC103363413,LOC108230764 coding upstream 69159 7674462 ~ 7707260 (-)
spryd3 LOC100708393,LOC102193977,LOC103366148,LOC102305037,LOC101464627,LOC102799700 coding upstream 172484 7777787 ~ 7844399 (-)
LOC120558974 zbtb39,LOC102796472 coding upstream 284524 7889827 ~ 7898293 (-)
agap2 agap2,LOC102796960,LOC100691413,LOC102307379 coding upstream 295470 7900773 ~ 7943081 (-)
LOC120558662 NA non-coding downstream 95542 7507296 ~ 7508425 (-)
G47817 NA non-coding downstream 103047 7500657 ~ 7500920 (-)
G47759 LOC104951079 non-coding downstream 161774 7441921 ~ 7442193 (-)
G47758 NA non-coding downstream 165103 7438503 ~ 7438864 (-)
G47757 NA non-coding downstream 166149 7437500 ~ 7437818 (-)
G47837 NA non-coding upstream 2588 7607891 ~ 7623479 (-)
G47949 NA non-coding upstream 327646 7932949 ~ 7955256 (-)
G47956 NA non-coding upstream 386566 7991869 ~ 7994732 (-)
G47971 NA non-coding upstream 441996 8047299 ~ 8074235 (-)
G47972 NA non-coding upstream 442519 8047822 ~ 8050421 (-)
G47814 NA other downstream 105165 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 567592 6955204 ~ 7036375 (-)
G47638 NA other downstream 798261 6804141 ~ 6805706 (-)
G47624 NA other downstream 882238 6696445 ~ 6721729 (-)
G47254 NA other downstream 2870682 4732796 ~ 4733285 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other upstream 166633 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other upstream 209848 7815151 ~ 7886850 (-)
ada ada other upstream 775814 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 1097662 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1773697 9379000 ~ 9408403 (-)

Expression


Co-expression Network