G47934 (LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018)


Basic Information

Item Value
gene id G47934
gene name LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7771936 ~ 8187551 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64005
ACTTTGGTCggtaaaactttatttttttcacattgaTAAAAAGGCACCGATCAGAGATCAATAAAGGGGAATGTATGCCTATTTAATACTCCTCTCCTTCATCATCCTCATCTCCCACACTATCAGCTCCAACCTCCTCATAATCCTTCTCCAGAGCTGCCATGTCCTCTCTGGCCTCAGAGAactctccctcctccatcccctCACCCACATACCAGTGAACAAAGGCGCGCTTAGCGTACATCAGATCAAACTTGTGGTCACCTTCCAATGCGTTAACTCCAACCATAAACATGCTGATGTCCCCTCTGGTCCTACAGGAGTTTTATTCTGAACAACCAAACTGATAATTAATAAACAGTTTTGGAACATATTTAAGACGGAATGGAATCAATCGTTTCCTGTTTGACTAGCACCTTTTAATATTCCTCTCCTTcatcctctccctccccctcaaTAGAGTCGACTCCCACCTCCTCATAATCCTTCTCCAGAGCGGCCATGTCCTCTCTGGCCTCAGAGAactctccctcctccatcccctCACCCACATACCAGTGAACAAAGGCGCGCTTAGCGTACATCAGATCAAACTTGTGGTCAAGCCGAGCCCAGGCCTCTGCAATAGCAGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGGTCTCCACCAGGAACTACAGTGGGCGGCTGGTAGTTGATGCCCACCTTGAAACCAGTGGGGCACCAGTCCACAAACTGGATGGAGCGCTTGGCTTTAATGGTGGAAATGGCAGCATTTACATCTTTGGGCACCACATCGCCACGATACAAAAGGCAGCAGGCCATGTATTTGCCGTGGCGAGGGTCACATTTCACAAACTGGTTGGCTGGTTCAAAGCAGGCGTTGGTGATTTGTGCCACCGTTATTTGCTCATGGAAAGCCTTTTCAGCAGAGACTACAGGGGCATAGGTGGCCAGGGGGAAGTGAATTCGGGGATATGGCACCAAGTTGGTCTGGAACTCTGCCAGATCAACATTGAGGGCACCGTCGAAACGAAGGGAGGCAGTGACGGAGGACACAATCTGACTGATCAACCTGTTCAGGTTGGTGTAAGAAGGACGCTCGATATCGAGGTTCCTACGGCAGATATCGTAGATGGCCTCGTTGTCCACCATGAAAGAACAGTCAGAGTGCTCCAGGGTGGTGTGGGTGGTCAGGATGGAGTTGTAGGGCTCCACCACAGCGGTGGACACCTGGGGAGCTGGGTAGACAGAAAACTCCAGCTTGGACTTCTTGCCGTAGTCGACAGACAGACGCTCCATCAGCAGGGAGGTGAAACCAGAGCCGGTGCCACCCCCGAAGCTGCGGAAAACCAGGAAGCCCTGAAGGCCGGTGCACTGGTCAGCCtgaggacagagagggac

Function

NR:

description
PREDICTED: tubulin alpha-1B chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64005 True 1418 TUCP 0.52 2 7771936 8187551

Neighbor

gene id symbol gene type direction distance location
LOC120558669 LOC103363413,LOC108230764 coding downstream 64676 7674462 ~ 7707260 (-)
fam120c fam120c coding downstream 139391 7612487 ~ 7632545 (-)
hsd17b10 hsd17b10 coding downstream 172162 7590901 ~ 7599774 (-)
LOC120558801 NA coding downstream 324087 7439183 ~ 7447849 (-)
LOC120558624 NA coding downstream 364258 7375726 ~ 7407678 (-)
jph2 jph2,LOC104937215 coding upstream 517 8188068 ~ 8217881 (-)
fitm2 fitm2 coding upstream 64627 8252178 ~ 8255966 (-)
LOC120559283 NA coding upstream 385128 8572679 ~ 8577776 (-)
gdi1 gdi1,LOC105918302,LOC100709395 coding upstream 445504 8633055 ~ 8643551 (-)
taf8 taf8 coding upstream 474925 8662476 ~ 8674082 (-)
G47837 NA non-coding downstream 148457 7607891 ~ 7623479 (-)
G47846 NA non-coding downstream 166633 7603967 ~ 7605303 (-)
LOC120558662 NA non-coding downstream 263511 7507296 ~ 7508425 (-)
G47817 NA non-coding downstream 271016 7500657 ~ 7500920 (-)
G47759 LOC104951079 non-coding downstream 329743 7441921 ~ 7442193 (-)
LOC120559498 NA non-coding upstream 94396 8281947 ~ 8296468 (-)
G48010 ttpal non-coding upstream 142566 8330117 ~ 8333521 (-)
G48128 NA non-coding upstream 424147 8611698 ~ 8654319 (-)
G48153 NA non-coding upstream 519989 8707540 ~ 8707965 (-)
LOC120558360 NA non-coding upstream 555784 8743335 ~ 8746512 (-)
G47814 NA other downstream 273134 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 735561 6955204 ~ 7036375 (-)
G47638 NA other downstream 966230 6804141 ~ 6805706 (-)
G47624 NA other downstream 1050207 6696445 ~ 6721729 (-)
G47254 NA other downstream 3038651 4732796 ~ 4733285 (-)
ada ada other upstream 193566 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 515414 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1191449 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 1239655 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1502178 9689729 ~ 9724134 (-)

Expression


Co-expression Network