G47949


Basic Information

Item Value
gene id G47949
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7932949 ~ 7955256 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64039
ACGGTTTCCAATTTCAGGTTTTATTATTTGGAAAATTAAGTCTCAAAAATCCAAAGATACATTTGAATAACAAGTGCACACAAATTCAAAGTGAGGTTTAATATATGGCATACCAATGCTTAAGATCtgtcaaaatgtttgtttacaccAGCGATGACTCCAAATCAGCAGCAGGAAATCCATATCAGCCAAGTTGACAGGTTCAAGTAAGACATAATTACAGTTTGTGTTAGTCCTTTAAGTTAAGAGCAAttcaaaaagagaaaacacatcTTAAAAAGAGAGAATTCATGAGCAGTGATTTATCAACAGGAAATGTCAAACGTCGAGCTAGGCGTCGGAATTCTATCATCAAAACTACAACACAAAACTTCAGCCTAATGTGCATCCTTAAACTAAACTTAAATAGATCCTGAAAAATATTTAACACGggtttttttgttggtttttttttttacaaagcatttaACACTGATGAACGAAAAAGAGCTGATGGCAACGGAgaacaaaaaatattaaaaaaaatctttcaacgaaaaaaagaaaaaaattgcaACCAAGAGCGCATTTTCACAATTAAtactattaaaaacaaaactgggATAATTGCGATAATCAGCGTTGTCCAAATTTACCCAATTATTTCAAATCAAATAGCACttcttcattattttttttttttacttttgtgatttCTTCCAGTTACACAGGAAGTAATGACACGTACCTGAATCCACTTCTCGACGACCAGAATCTATACTAAAGCAACGTCACTGCGCGACACAAAGGAACATTGATTAATTAAATACAGGAAGGAGTCGATTATTTCGGCTTTCAAAGACCTCAACTATGCAGGCAAACGTCCCAACTAGAGGGGCAACTACAAGGCAAACCCATCGAGaatgatttatatatataaaaaaaaaaaagattatgtaCAACATCAAGGATGCAGTCCATTGGCATCCTAATATCTCCGACTGTTAAAAGTTAGCTGGCTCAGTTACAGTTCATAAATACTTTGAACCCGAATGACTAGCAACTACATTACCTAACATCTATTCTCGCTTCCTAATCCTGTTAAATCCCGGCATTTGTGGCAtcggaaaaaaagaacatttacatacagttttaAAACTACTCTTTACAACACATGTCCAGTATGTGCCCCCCGCCCTCCCCACTCCCCCTGAATGATGAACAAACTCATCCCACTGGACATGTCTGGGGTATACAGTTCTACACATCACTTATAGCACTGACCGGAGGaatatatatttgttgttaTGTGGTGCCATTACATTAGAGAcaggggggggagagaaaaaaaaaactcaaggtGCATACACGTTATTTTGTCGGACAGGGCACAGTCATTTGGTTGGCGTGTGTACAAGAAATCAACAAAAGAGGCGGTTTTTGTCGGTGCAGGACACATGCGGAGATGTCTCATCCCTTAACTAGCAAGAAATCTGGTACTCAAATCAAGGCTGGGTCACGATACCAACAAGTTACCCTTGGTATTTTCAAGTTATCCTTTCATACATAAGTATCCAGGTCTTCCAGCTGGAGCTCTGGCAATATTTCTGGACAGGTTGTTGTAGTTTCTCAGTCTCaggtgaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64039 True 1677 lncRNA 0.38 2 7932949 7955256

Neighbor

gene id symbol gene type direction distance location
LOC120558974 zbtb39,LOC102796472 coding downstream 34656 7889827 ~ 7898293 (-)
spryd3 LOC100708393,LOC102193977,LOC103366148,LOC102305037,LOC101464627,LOC102799700 coding downstream 88550 7777787 ~ 7844399 (-)
LOC120558669 LOC103363413,LOC108230764 coding downstream 225689 7674462 ~ 7707260 (-)
fam120c fam120c coding downstream 300404 7612487 ~ 7632545 (-)
hsd17b10 hsd17b10 coding downstream 333175 7590901 ~ 7599774 (-)
nckap5l nckap5l coding upstream 89705 8044961 ~ 8100721 (-)
kansl2 kansl2,LOC102799133 coding upstream 145683 8100939 ~ 8112235 (-)
LOC120559931 NA coding upstream 150805 8106061 ~ 8106195 (-)
ccnt1 ccnt1 coding upstream 158869 8114125 ~ 8120699 (-)
LOC120558984 sarnp,LOC102800079 coding upstream 168291 8123547 ~ 8130737 (-)
G47837 NA non-coding downstream 309470 7607891 ~ 7623479 (-)
G47846 NA non-coding downstream 327646 7603967 ~ 7605303 (-)
LOC120558662 NA non-coding downstream 424524 7507296 ~ 7508425 (-)
G47817 NA non-coding downstream 432029 7500657 ~ 7500920 (-)
G47759 LOC104951079 non-coding downstream 490756 7441921 ~ 7442193 (-)
G47956 NA non-coding upstream 36613 7991869 ~ 7994732 (-)
G47971 NA non-coding upstream 92043 8047299 ~ 8074235 (-)
G47972 NA non-coding upstream 92566 8047822 ~ 8050421 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding upstream 223399 8178655 ~ 8179100 (-)
LOC120559498 NA non-coding upstream 326691 8281947 ~ 8296468 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 46099 7815151 ~ 7886850 (-)
G47814 NA other downstream 434147 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 896574 6955204 ~ 7036375 (-)
G47638 NA other downstream 1127243 6804141 ~ 6805706 (-)
G47624 NA other downstream 1211220 6696445 ~ 6721729 (-)
ada ada other upstream 425861 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 747709 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1423744 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 1471950 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1734473 9689729 ~ 9724134 (-)

Expression


Co-expression Network