G47971


Basic Information

Item Value
gene id G47971
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8047299 ~ 8074235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64064
gtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctctctctctctctctctctctctctctctctctctctctctctctctcggtctctctctctctctctctctctctctctctctctctggtataTACAGGAACCCTGAAGTTGGTACTTTTTGAACACCTTTTTAAGACCCTTTCCTTACATTTAACACCTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64064 True 204 lncRNA 0.46 2 8047299 8074235

Neighbor

gene id symbol gene type direction distance location
agap2 agap2,LOC102796960,LOC100691413,LOC102307379 coding downstream 104218 7900773 ~ 7943081 (-)
LOC120558974 zbtb39,LOC102796472 coding downstream 149006 7889827 ~ 7898293 (-)
spryd3 LOC100708393,LOC102193977,LOC103366148,LOC102305037,LOC101464627,LOC102799700 coding downstream 202900 7777787 ~ 7844399 (-)
LOC120558669 LOC103363413,LOC108230764 coding downstream 340039 7674462 ~ 7707260 (-)
fam120c fam120c coding downstream 414754 7612487 ~ 7632545 (-)
kansl2 kansl2,LOC102799133 coding upstream 26704 8100939 ~ 8112235 (-)
LOC120559931 NA coding upstream 31826 8106061 ~ 8106195 (-)
ccnt1 ccnt1 coding upstream 39890 8114125 ~ 8120699 (-)
LOC120558984 sarnp,LOC102800079 coding upstream 49312 8123547 ~ 8130737 (-)
LOC120558989 tuba1c,LOC106676044,LOC102211704,LOC103363443,LOC103148207,LOC107557552,LOC108255233 coding upstream 90234 8164469 ~ 8169726 (-)
G47956 NA non-coding downstream 52567 7991869 ~ 7994732 (-)
G47949 NA non-coding downstream 92043 7932949 ~ 7955256 (-)
G47837 NA non-coding downstream 423820 7607891 ~ 7623479 (-)
G47846 NA non-coding downstream 441996 7603967 ~ 7605303 (-)
LOC120558662 NA non-coding downstream 538874 7507296 ~ 7508425 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding upstream 104420 8178655 ~ 8179100 (-)
LOC120559498 NA non-coding upstream 207712 8281947 ~ 8296468 (-)
G48010 ttpal non-coding upstream 255882 8330117 ~ 8333521 (-)
G48128 NA non-coding upstream 537463 8611698 ~ 8654319 (-)
G48153 NA non-coding upstream 633305 8707540 ~ 8707965 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 160449 7815151 ~ 7886850 (-)
G47814 NA other downstream 548497 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 1010924 6955204 ~ 7036375 (-)
G47638 NA other downstream 1241593 6804141 ~ 6805706 (-)
G47624 NA other downstream 1325570 6696445 ~ 6721729 (-)
ada ada other upstream 306882 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 628730 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1304765 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 1352971 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1615494 9689729 ~ 9724134 (-)

Expression


Co-expression Network