G48128


Basic Information

Item Value
gene id G48128
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8611698 ~ 8654319 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64266
TAATTTTTAAATCATAATTTATAGACATCTTTATTTTCAATTACAAGACAatgtacattacatgtcatgGCAATTGCACATTAAAAAGCAGAACTGAGGCACTGTTATTAAATGAATGCACCTGAAGCAAGTAGTAAACTTTAAGGgtgagcagtgttttttttatatgaataaATAACTCGTCAAGAAAATATAGGATTTAAGTGGTGGCACTTGAGTTGGATAGTCTGTAAGAGTGAGAACAGAACTAATCCCATTTTAAGTATTGGCATATTTTTGTAAGGCAATTCCAAAACAGTCACAGACAGCCATCTATTATTTATACACAGGCACATCTTGCATTAAGCAGTAGTCATTAAATTACAGTtgagttgagaaaaaaaaaatgaagtaaGAACTGAGGTCTGAAACGGTCCTACAGCATCCAGCAATCACATTCATGTTGGCACAGACAAGACATTCTCTGGTTACGAGAAATTATTGCTAATTATTTCACTGAAAATAGCCACTGTGTATGGCCAACAGTGGCACAAAAACATCTCTTAGCACATGCACTCAAAACCAACTCGTATAAAAAGGTGCATCCACTTTGGCACTTGCAAATGGGGAGAGATGAAATGGAATGCGCCTTGCAAGACAACAGTATCCCACAGACAGTTGTGGAAGGATTTAGGAGAGAAATCTACAGGAGAGGTTATCAGAGGGAAAGTCTATCTGACAAATATCTTCAAAGAAAAAGGCCCAAACGCACACAAGCTACAAGACAGGGAGGGACTCTCCTAGCAGGCACTGAAGGactgaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgt
>TU64267
TAATTTTTAAATCATAATTTATAGACATCTTTATTTTCAATTACAAGACAatgtacattacatgtcatgGCAATTGCACATTAAAAAGCAGAACTGAGGCACTGTTATTAAATGAATGCACCTGAAGCAAGTAGTAAACTTTAAGGgtgagcagtgttttttttatatgaataaATAACTCGTCAAGAAAATATAGGATTTAAGTGGTGGCACTTGAGTTGGATAGTCTGTAAGAGTGAGAACAGAACTAATCCCATTTTAAGTATTGGCATATTTTTGTAAGGCAATTCCAAAACAGTCACAGACAGCCATCTATTATTTATACACAGGCACATCTTGCATTAAGCAGTAGTCATTAAATTACAGTtgagttgagaaaaaaaaaatgaagtaaGAACTGAGGTCTGAAACGGTCCTACAGCATCCAGCAATCACATTCATGTTGGCACAGACAAGACATTCTCTGGTTACGAGAAATTATTGCTAATTATTTCACTGAAAATAGCCACTGTGTATGGCCAACAGTGGCACAAAAACATCTCTTAGCACATGCACTCAAAACCAACTCGTATAAAAAGGTGCATCCACTTTGGCACTTGCAAATGGGGAGAGATGAAATGGAATGCGCCTTGCAAGACAACAGTATCCCACAGACAGTTGTGGAAGGATTTAGGAGAGAAATCTACAGGAGAGGTTATCAGAGGGAAAGTCTATCTGACAAATATCTTCAAAGAAAAAGGCCCAAACGCACACAAGCTACAAGACAGGGAGGGACTCTCCTAGCAGGCACTGAAGGactgaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64266 False 848 lncRNA 0.38 2 8611698 8654319
TU64267 True 890 lncRNA 0.39 2 8611698 8654319

Neighbor

gene id symbol gene type direction distance location
LOC120559283 NA coding downstream 33922 8572679 ~ 8577776 (-)
fitm2 fitm2 coding downstream 355732 8252178 ~ 8255966 (-)
jph2 jph2,LOC104937215 coding downstream 393817 8188068 ~ 8217881 (-)
LOC120558991 LOC108255233,LOC108247626,LOC103363443,LOC102224440,LOC102211704,LOC108251018 coding downstream 436706 8172190 ~ 8174992 (-)
LOC120558989 tuba1c,LOC106676044,LOC102211704,LOC103363443,LOC103148207,LOC107557552,LOC108255233 coding downstream 441972 8164469 ~ 8169726 (-)
taf8 taf8 coding upstream 8157 8662476 ~ 8674082 (-)
g0s2 NA coding upstream 21798 8676117 ~ 8677135 (-)
camk1gb NA coding upstream 28312 8682631 ~ 8700177 (-)
mical1 LOC103361624 coding upstream 62441 8716760 ~ 8743028 (-)
src LOC103385228,LOC101479745,LOC102203088,LOC103361614 coding upstream 92648 8746967 ~ 8788376 (-)
G48010 ttpal non-coding downstream 278177 8330117 ~ 8333521 (-)
LOC120559498 NA non-coding downstream 315230 8281947 ~ 8296468 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding downstream 432598 8178655 ~ 8179100 (-)
G47971 NA non-coding downstream 537463 8047299 ~ 8074235 (-)
G47972 NA non-coding downstream 561277 8047822 ~ 8050421 (-)
G48153 NA non-coding upstream 53221 8707540 ~ 8707965 (-)
LOC120558360 NA non-coding upstream 89016 8743335 ~ 8746512 (-)
G48255 NA non-coding upstream 422756 9077075 ~ 9088743 (-)
G48285 NA non-coding upstream 556605 9210924 ~ 9212825 (-)
G48306 NA non-coding upstream 627977 9282296 ~ 9282522 (-)
ada ada other downstream 201964 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 424147 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 724848 7815151 ~ 7886850 (-)
G47814 NA other downstream 1112896 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 1575323 6955204 ~ 7036375 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 48646 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 724681 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 772887 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1035410 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 1073555 9727874 ~ 9753686 (-)

Expression


Co-expression Network