G48153


Basic Information

Item Value
gene id G48153
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8707540 ~ 8707965 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64295
cataaaagtatcaacgttcggtgcccagccctggttaaagtgatggttcggagtaatttcaccctaggctgcttttcaccttgacctcgagccaaaacAACCCCCCATAAGCTTTTTATCCCTTGTTTTAACATAGGTCAAGTTAGTgttatcagctggttagcttagtgcaggcgctaatggatccacgtttgtatctcgtaaagttcaattcaattttatttatagtatcaaatcataacaagagttatctcgagacactttacagatagagtaggtctacaccacactctatcatttacaaagccccaacaattctaataattcccccaagagcaaccagtgcgacagtggcgaggaaaaactccctattaggaagaaacctgggacagacccaggctcttggtaggcggtgtctgacggtgc

Function

NR:

description
PREDICTED: matrix metalloproteinase-24 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64295 True 426 lncRNA 0.44 1 8707540 8707965

Neighbor

gene id symbol gene type direction distance location
camk1gb NA coding downstream 7363 8682631 ~ 8700177 (-)
g0s2 NA coding downstream 30405 8676117 ~ 8677135 (-)
taf8 taf8 coding downstream 33458 8662476 ~ 8674082 (-)
gdi1 gdi1,LOC105918302,LOC100709395 coding downstream 63989 8633055 ~ 8643551 (-)
LOC120559283 NA coding downstream 129764 8572679 ~ 8577776 (-)
mical1 LOC103361624 coding upstream 8795 8716760 ~ 8743028 (-)
src LOC103385228,LOC101479745,LOC102203088,LOC103361614 coding upstream 39002 8746967 ~ 8788376 (-)
kcng1 kcng1 coding upstream 84569 8792534 ~ 8841006 (-)
nfatc2a nfatc2 coding upstream 141945 8849910 ~ 8875122 (-)
LOC120559208 atp9a coding upstream 175286 8883251 ~ 8933289 (-)
G48128 NA non-coding downstream 53221 8611698 ~ 8654319 (-)
G48010 ttpal non-coding downstream 374019 8330117 ~ 8333521 (-)
LOC120559498 NA non-coding downstream 411072 8281947 ~ 8296468 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding downstream 528440 8178655 ~ 8179100 (-)
G47971 NA non-coding downstream 633305 8047299 ~ 8074235 (-)
LOC120558360 NA non-coding upstream 35370 8743335 ~ 8746512 (-)
G48255 NA non-coding upstream 369110 9077075 ~ 9088743 (-)
G48285 NA non-coding upstream 502959 9210924 ~ 9212825 (-)
G48306 NA non-coding upstream 574331 9282296 ~ 9282522 (-)
G48311 NA non-coding upstream 576952 9284917 ~ 9285252 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 2057 8702965 ~ 8705483 (-)
ada ada other downstream 297806 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 519989 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 820690 7815151 ~ 7886850 (-)
G47814 NA other downstream 1208738 7485427 ~ 7498802 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 671035 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 719241 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 981764 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 1019909 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 1058346 9766311 ~ 9785241 (-)

Expression


Co-expression Network