G48285


Basic Information

Item Value
gene id G48285
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9210924 ~ 9212825 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64476
CTTTTCCATTCATCAGATTGATTTGCTGCGTTGCTTCAACGGTAATTACGCTAATACAAAATACACGTTTCTAGACACATTCAGTAGTCCACCCATAATAAAACCAGATGTGGAAATGATTCGCATCTTCCAAGAGTTCTGTCATATCTGTGTCAGAAACAGGAGATCTTGTTTATGAAAGAAGTGCATATGAACATATTGACACAGTGTAGGCCTGAAGTTTAAATAATTGGCCAAACTATTGAGTTCTGTTTATTGTTACCTTCTCTCTCCTTGTCTATTCTCGCATTTGTATTTAACGCCTGTTGGCCGCAATTCACACTTAAATGTCTAAATAAACTCAATAAATGCATTGGTTAATGTCAATATTTTAGTCtagatactgttttaaaaccatgtaaagataaatgctataaaacccacccaaaattcaatgaaagtaatcattcattttacctgcgaagaatgTTGTATCCATACAATGTACATCCATGCATCAAAGTTATTTTTGAGCAATTTGGTTGAATAAAAccaatatttctgatataaaacaaaactttaaaaacgaggataacacaagggttaagaatcACAAGCCCTGATGATATATCTAATGTGTGCACAGGAAATAACTGTCTCTCCCTTTGTTTCACAAGTTGACCATTAACAACAGCTTTGATCTACTCATGAGTTTATCTGTCTAGGCCATGTGAGGATGTGTAAAGATTTGAAGGAAGAGAATAATTAGTCACACTAAGATTTGTGTGGGAAAAGCCTTCAGGAAGAGCACTGCTCATTTGTTTAGTTTTAATAAAAAGACTTGATCAATAATGACTTTTCAAAAGGAtttacatagtatagtatactccagtagtggaaagtaactaattacatttacatttaaggaCAATCTCGGGAAGTCATTTTACTTATTTCCATTCTCTGCTACTACATACTTGTTGAAATAACGTACGTCACTGCATTTCtttgacagctatagttactagCTACTTTTCAGACTATTTGACATACGTGATAAGCTTATAAATAACACTTTACACCAATAAAGACTACACCAATGGTTCCCAACATTTTTGGATTGTGAACCCATGTCTAGACACATTTAAGATCTCCAAGAGTTGTTAGTAGTTCCAGCAAAGAGAAAACTCTCATCCCACGATTGATGATTTCAATTACTATCCAAGCCAAAATAAGTCAAATTATTCAATAGTTCATCAAAAAAATAAGcaaaagattagaaaaaaatttaaaaaatactgttaGATTGTGGGGGacgttgtttttttctcatttcctACCCCAATAATCATCTCAGGACCCCTCAGACTTATCTTGTGACTGTAGAGGGATCTCAATGCTAGATTGGGAACCACAGGATTAACTATGTGACTATGTGTAAAGTAGTTCTAACTAGCTCCACTTCACATTGATGCATCAGtattagggccctattttaatgatctaaggggacggcgtgaagcgccttgCACAGGTGCATTTAGGGCCCGTGCGCCGGGTGCATGGTTCAAAGGGGTTGTACTTTGTGTCataattaattcataggtgtatttttggcgtaacatgcaataaaccaatcgaTCAACCAAGCAACCAATGGCAcaatcactttccgctgcctcaagatagaaatacgccaagaatgcacctgaacacacctccctgtaagaccagcacgcccactGGTTCTTTTAATCTCACCTACATTTGGTCAAAAAACATCTGTGTAGTTTTAAATATTACTCTCATCTTTCCTATTGTGTTGTTTCAATTGTGCCTTTGTATTTTAAGACAGTTCTGTGGATTTCATGGCTAAGCTTCAACTCAATTTTACAGACATGCACACTGTGCTAAATCATGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64476 True 1902 lncRNA 0.36 1 9210924 9212825

Neighbor

gene id symbol gene type direction distance location
bcas1 NA coding downstream 11950 9180687 ~ 9198974 (-)
znf217 NA coding downstream 35710 9168882 ~ 9175214 (-)
zfp64 zfp64 coding downstream 220613 8985972 ~ 8990311 (-)
sall4 sall4 coding downstream 267117 8937739 ~ 8943807 (-)
LOC120559208 atp9a coding downstream 277635 8883251 ~ 8933289 (-)
cbln4 cbln4,LOC102783801 coding upstream 74723 9287548 ~ 9292138 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding upstream 100061 9312886 ~ 9354630 (-)
irx7 LOC103370648 coding upstream 157136 9369961 ~ 9371630 (-)
nol9 nol9 coding upstream 309270 9522095 ~ 9535683 (-)
klhl21 klhl21 coding upstream 335845 9548670 ~ 9685634 (-)
G48255 NA non-coding downstream 122181 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 464412 8743335 ~ 8746512 (-)
G48153 NA non-coding downstream 502959 8707540 ~ 8707965 (-)
G48128 NA non-coding downstream 556605 8611698 ~ 8654319 (-)
G48010 ttpal non-coding downstream 877403 8330117 ~ 8333521 (-)
G48306 NA non-coding upstream 69471 9282296 ~ 9282522 (-)
G48311 NA non-coding upstream 72092 9284917 ~ 9285252 (-)
G48430 NA non-coding upstream 352139 9564964 ~ 9565214 (-)
G48436 NA non-coding upstream 548065 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 551243 9764068 ~ 9766189 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 505441 8702965 ~ 8705483 (-)
ada ada other downstream 801190 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 1023373 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 1324074 7815151 ~ 7886850 (-)
G47814 NA other downstream 1712122 7485427 ~ 7498802 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 166175 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 214381 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 476904 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 515049 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 553486 9766311 ~ 9785241 (-)

Expression


Co-expression Network