G48311


Basic Information

Item Value
gene id G48311
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9284917 ~ 9285252 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64502
TCACATTGTTTGGCTTATAATGACCGTGGAAGCTGGACTGTGCAGCTGAAATGATCCCAGTTACAGGGAAATATAATCGCTTcgtttttcatttaaaggtgctctaagcgaggtcacgcattttttaggctacaacatttttttgtcacatacagcaaacatctcctcactatctgctagctgcctgtcccctgaacacactgtaaaaaaacgcggtctatgtagacagcccaggctccacaaacggcaacaaaaacacattgcgccaacctgcaccaccaaacataacaaacagagttccagccaataaccgacaagaaggattttgggGTGGGA

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU64502 True 336 lncRNA 0.45 1 9284917 9285252

Neighbor

gene id symbol gene type direction distance location
bcas1 NA coding downstream 85943 9180687 ~ 9198974 (-)
znf217 NA coding downstream 109703 9168882 ~ 9175214 (-)
zfp64 zfp64 coding downstream 294606 8985972 ~ 8990311 (-)
sall4 sall4 coding downstream 341110 8937739 ~ 8943807 (-)
LOC120559208 atp9a coding downstream 351628 8883251 ~ 8933289 (-)
cbln4 cbln4,LOC102783801 coding upstream 2296 9287548 ~ 9292138 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding upstream 27634 9312886 ~ 9354630 (-)
irx7 LOC103370648 coding upstream 84709 9369961 ~ 9371630 (-)
nol9 nol9 coding upstream 236843 9522095 ~ 9535683 (-)
klhl21 klhl21 coding upstream 263418 9548670 ~ 9685634 (-)
G48306 NA non-coding downstream 2395 9282296 ~ 9282522 (-)
G48285 NA non-coding downstream 72092 9210924 ~ 9212825 (-)
G48255 NA non-coding downstream 196174 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 538405 8743335 ~ 8746512 (-)
G48153 NA non-coding downstream 576952 8707540 ~ 8707965 (-)
G48430 NA non-coding upstream 279712 9564964 ~ 9565214 (-)
G48436 NA non-coding upstream 475638 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 478816 9764068 ~ 9766189 (-)
G48479 NA non-coding upstream 607716 9892968 ~ 9893826 (-)
G48477 cptp non-coding upstream 631326 9916578 ~ 9918879 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 579434 8702965 ~ 8705483 (-)
ada ada other downstream 875183 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 1097366 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 1398067 7815151 ~ 7886850 (-)
G47814 NA other downstream 1786115 7485427 ~ 7498802 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 93748 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 141954 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 404477 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 442622 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 481059 9766311 ~ 9785241 (-)

Expression


Co-expression Network