G48479


Basic Information

Item Value
gene id G48479
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9892968 ~ 9893826 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64729
cgcacatgctcagtagctcagatgtagagcatgtcagctagctaactctagagacagtaaaagagagcctgtttctccaactttggtcagttacaaggcaggattagctgggagatttctaaatgagggcacacatGAGACTTTGAGATTTTACTGGGACGTCACGTCACATGCCCCAGTTAAAACGCCCAGGAGTTGAACGTCATTACCGTCACGATTCAgcgaaaagaagacaaaaatgcCGAAGACTTCATCGGTGTGGGAGACCTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64729 True 274 lncRNA 0.46 2 9892968 9893826

Neighbor

gene id symbol gene type direction distance location
LOC120558654 LOC103359731 coding downstream 11272 9787365 ~ 9881696 (-)
klhl21 klhl21 coding downstream 207334 9548670 ~ 9685634 (-)
nol9 nol9 coding downstream 357285 9522095 ~ 9535683 (-)
irx7 LOC103370648 coding downstream 521338 9369961 ~ 9371630 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding downstream 538338 9312886 ~ 9354630 (-)
ints11 cpsf3l coding upstream 10482 9904308 ~ 9916135 (-)
zgc:193690 LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919 coding upstream 31351 9925177 ~ 9933192 (-)
mul1b mul1 coding upstream 84427 9978253 ~ 9985133 (-)
LOC120558779 LOC101471596,LOC102789400,LOC103365659 coding upstream 201087 10094913 ~ 10109100 (-)
LOC120558781 LOC105013598,LOC108237630,LOC101472165,LOC107390417,LOC101079871 coding upstream 237865 10131691 ~ 10136381 (-)
LOC120558310 NA non-coding downstream 126779 9764068 ~ 9766189 (-)
G48436 NA non-coding downstream 130519 9760890 ~ 9762449 (-)
G48430 NA non-coding downstream 327754 9564964 ~ 9565214 (-)
G48311 NA non-coding downstream 607716 9284917 ~ 9285252 (-)
G48306 NA non-coding downstream 610446 9282296 ~ 9282522 (-)
G48477 cptp non-coding upstream 22752 9916578 ~ 9918879 (-)
LOC120558372 NA non-coding upstream 120577 10014403 ~ 10018354 (-)
G48522 NA non-coding upstream 129302 10023128 ~ 10023993 (-)
G48569 NA non-coding upstream 405718 10299544 ~ 10299879 (-)
G48617 LOC103365731,LOC108237576,LOC102292634,LOC100710458,LOC104928629,LOC101473555 non-coding upstream 409625 10303451 ~ 10375462 (-)
hipk1a LOC103359735 other downstream 107727 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 139282 9727874 ~ 9753686 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other downstream 168834 9689729 ~ 9724134 (-)
plekhg5b plekhg5 other downstream 373513 9427206 ~ 9519455 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other downstream 484565 9379000 ~ 9408403 (-)
G48523 NA other upstream 131168 10024994 ~ 10025825 (-)
G48697 NA other upstream 747579 10641405 ~ 10733887 (-)
LOC120558961 NA other upstream 1610001 11503827 ~ 11508337 (-)
srxn1 srxn1 other upstream 1992139 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 2065553 11959379 ~ 11979035 (-)

Expression


Co-expression Network