G48715


Basic Information

Item Value
gene id G48715
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10689457 ~ 10698533 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65068
CCCAAGCCTATAGCCAACGTATGTCCGTGattgtCTGGTGTCCTTGGGTGGGAATCttttgtggtggtggtggtggtggtgggtttAGTTGGGGGTGTTATTCTTTGACATGTTGGAAGTCCAGGTGACCACTGACTATCTATTCCACATGTCAGGGTGCGTCCTCCTTCCATAACATACCCAGATTTGCACTTGTATGTCACCGTAGACCTGTATCCATGAGGGGGTCGAGAACCATCAACCTGTTCACCATTGGCTATATTAGGATCCTCACATTGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65068 True 281 lncRNA 0.49 3 10689457 10698533

Neighbor

gene id symbol gene type direction distance location
ptpn22 LOC106912495,LOC103467961 coding downstream 122982 10542933 ~ 10566475 (-)
si:ch73-206d17.1 NA coding downstream 364246 10316819 ~ 10325211 (-)
LOC120558781 LOC105013598,LOC108237630,LOC101472165,LOC107390417,LOC101079871 coding downstream 553076 10131691 ~ 10136381 (-)
LOC120558779 LOC101471596,LOC102789400,LOC103365659 coding downstream 580357 10094913 ~ 10109100 (-)
mul1b mul1 coding downstream 704324 9978253 ~ 9985133 (-)
si:dkey-261h17.1 LOC100710642 coding upstream 169325 10867858 ~ 10906926 (-)
plxna2 LOC101478991,LOC100710907,LOC102296543 coding upstream 211285 10909818 ~ 11129310 (-)
LOC120558517 slc26a9 coding upstream 639074 11337607 ~ 11348247 (-)
slc48a1a slc48a1,LOC101074998 coding upstream 649753 11348286 ~ 11360195 (-)
itga5 LOC103365860,LOC103385260 coding upstream 683649 11382182 ~ 11421461 (-)
G48638 NA non-coding downstream 110093 10579076 ~ 10579364 (-)
G48623 NA non-coding downstream 284660 10404137 ~ 10404797 (-)
G48617 LOC103365731,LOC108237576,LOC102292634,LOC100710458,LOC104928629,LOC101473555 non-coding downstream 313995 10303451 ~ 10375462 (-)
G48569 NA non-coding downstream 389578 10299544 ~ 10299879 (-)
G48522 NA non-coding downstream 665464 10023128 ~ 10023993 (-)
LOC120558409 NA non-coding upstream 11229 10709762 ~ 10710383 (-)
LOC120558410 NA non-coding upstream 136353 10834886 ~ 10865045 (-)
G48749 NA non-coding upstream 450541 11149074 ~ 11149382 (-)
G48756 NA non-coding upstream 509861 11208394 ~ 11208617 (-)
G48761 NA non-coding upstream 522464 11220997 ~ 11221479 (-)
G48523 NA other downstream 663632 10024994 ~ 10025825 (-)
hipk1a LOC103359735 other downstream 904216 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 935771 9727874 ~ 9753686 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other downstream 965323 9689729 ~ 9724134 (-)
plekhg5b plekhg5 other downstream 1170002 9427206 ~ 9519455 (-)
LOC120558961 NA other upstream 805294 11503827 ~ 11508337 (-)
srxn1 srxn1 other upstream 1187432 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 1260846 11959379 ~ 11979035 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other upstream 1428353 12126886 ~ 12128425 (-)
dnmt3ba NA other upstream 1448881 12147414 ~ 12169209 (-)

Expression


Co-expression Network