G49083 (LOC103354491,LOC102226477,LOC108232148)


Basic Information

Item Value
gene id G49083
gene name LOC103354491,LOC102226477,LOC108232148
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12126886 ~ 12128425 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65528
TGTCCTTGCCGCCCATTTCCGCCCTGTTTGAGAAGCAGCTCACTTTTCGATTGTTTATGTTAGTTGAGCATTAATTTGACCTTAATTCACAGGTAGTGTGTTTGGCTGTCTGTGATGCTTTGAGCGAGGCTGGGCTGCAGGGACAGGCCGATGGTGGAAACATGACTTCTGAGTAACGCCCAGTTACTTTCTCTGCTCAGTATGAACAGCGAGGAAGAATTTTACGACGCTGAGACAGGGCTGGAGTCAGATGATTCCTGTGAGGTCAGTTTTAAAGATGCCCTGGTGTTTGACAGTAAGCAAGTGACTGACGGCGGAGACGAACAGGAGAATGGAGTGTGGGAGCGCAGGAAAATCCTGCCTGCTGAAATGATTTCCAGGAACAATTACAGTGTTTGGAATATATTGAAGAAATGCATCGGCATGGAGCTGTCCAAAATAGC
>TU65529
TGTCCTTGCCGCCCATTTCCGCCCTGTTTGAGAAGCAGCTCACTTTTCGATTGTTTATGTTAGTTGAGCATTAATTTGACCTTAATTCACAGGTATATCGAAATGAATTGTGTTTAAATCTTCGTGTCAGTGTCTACGTTGATAACGTTAGCTTTTCTCTGCTGCCCACCCTCTAGCTAAAGGTTTAACTTAGCAGCAGCGATGCTAACGGCTGGTTAGCTAGTCAGAGCTAACTAATAGCTGAAGCTCTTTGAGGAGCAGAGCTGCTAACAGCGAGCTAGAAacctgcttttttattttattaatagcATGTACttgataatgtgtgtgtgccccTACTTAGTGTAAGGAGTCCGTGCTGTTGCAGGTAGTGTGTTTGGCTGTCTGTGATGCTTTGAGCGAGGCTGGGCTGCAGGGACAGGCCGATGGTGGAAACATGACTTCTGAGTAACGCCCAGTTACTTTCTCTGCTCAGTATGAACAGCGAGGAAGAATTTTACGACGCTGAGACAGGGCTGGAGTCAGATGATTCCTGTGAGGTCAGTTTTAAAGATGCCCTGGTGTTTGACAGTAAGCAAGTGACTGACGGCGGAGACGAACAGGAGAATGGAGTGTGGGAGCGCAGGAAAATCCTGCCTGCTGAAATGATTTCCAGGAACAATTACAGTGTTTGGAATATATTGAAGAAATGCATCGGCATGGAGCTGTCCAAAATAGC

Function

NR:

description
PREDICTED: oxysterol-binding protein-related protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65528 False 443 TUCP 0.47 5 12126886 12128425
TU65529 True 718 TUCP 0.46 4 12126886 12128425

Neighbor

gene id symbol gene type direction distance location
LOC120559362 LOC102786474,LOC103354471 coding downstream 7740 12103891 ~ 12119146 (-)
LOC120559249 ptpn1 coding downstream 127441 11986410 ~ 11999445 (-)
LOC120559253 ube2v1,LOC102081483,LOC108249566,LOC101171992,LOC106536681,LOC107391298 coding downstream 169495 11953175 ~ 11957391 (-)
slc52a3 slc52a3 coding downstream 181376 11940260 ~ 11945510 (-)
scrt2 scrt2,LOC108249568,LOC102228875,LOC107391295 coding downstream 219273 11898818 ~ 11907613 (-)
LOC120558333 NA coding upstream 95879 12224304 ~ 12230288 (-)
dnajc5aa dnajc5,LOC104933326,LOC101169856,LOC107090698 coding upstream 104680 12233105 ~ 12237737 (-)
ythdf1 LOC104938233,LOC103354577,LOC106952594,LOC100697389,LOC102786472 coding upstream 131572 12259997 ~ 12270531 (-)
nkain5 LOC103354565,LOC101477820 coding upstream 143062 12271487 ~ 12280037 (-)
uckl1a LOC103355333,LOC101079427,LOC103139074,LOC101476695,LOC102196708,LOC102308715,LOC103385400,LOC101173865 coding upstream 177833 12306258 ~ 12323341 (-)
G49084 NA non-coding downstream 5336 12119658 ~ 12121550 (-)
G49024 NA non-coding downstream 63631 12003267 ~ 12063255 (-)
G48911 NA non-coding downstream 511177 11607970 ~ 11615709 (-)
G48910 ankrd52 non-coding downstream 520272 11605733 ~ 11606614 (-)
G48907 ankrd52 non-coding downstream 526378 11600292 ~ 11600508 (-)
G49092 NA non-coding upstream 12510 12140935 ~ 12141414 (-)
G49112 NA non-coding upstream 18303 12146728 ~ 12147033 (-)
G49118 NA non-coding upstream 83318 12211743 ~ 12213541 (-)
G49115 NA non-coding upstream 114777 12243202 ~ 12244833 (-)
LOC120558423 NA non-coding upstream 223002 12351427 ~ 12368708 (-)
peds1 LOC104919928,LOC103354371 other downstream 147851 11959379 ~ 11979035 (-)
srxn1 srxn1 other downstream 235747 11885965 ~ 11891139 (-)
LOC120558961 NA other downstream 618549 11503827 ~ 11508337 (-)
G48697 NA other downstream 1392999 10641405 ~ 10733887 (-)
G48523 NA other downstream 2101061 10024994 ~ 10025825 (-)
dnmt3ba NA other upstream 18989 12147414 ~ 12169209 (-)
ppdpfa LOC104933328,LOC101073585 other upstream 92309 12220734 ~ 12223028 (-)
fkbp1aa LOC100692950,LOC107391264,LOC103354614,LOC101168621 other upstream 260556 12388981 ~ 12391677 (-)
prickle3 prickle3,LOC102790576 other upstream 287178 12415603 ~ 12439909 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other upstream 796033 12924458 ~ 13221338 (-)

Expression


Co-expression Network