G49092


Basic Information

Item Value
gene id G49092
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12140935 ~ 12141414 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65542
aaaacaaAGATCTAAACTTGTAACTTGATGAGCTGGCTGCAGTTATTCAGTGAcagtgaataataataataataataataataatacattttatttggagGCGCCATTCAAAACACCCAAGGTCACCTTACATTagataaaaaacataataaaacagcAAGACAGGCAATGCCAAAGACAAGACACATGGAACAAGTGAAAGTGAAGtcacacaaacagagaaagagagagagagagggggagaggaggaggatcaCACTCCTGACAGGCGAGGAAATCTTATCTTATTAACTTCTTAGCagttactttttcttttttgagcaTGTGACGTAACAGCTGATTACTACGGCATTTCTGCAGCTTAAAAAGAATCAGATTTCAGGGAGAGGTGTGATTGTGAAGCTATATAAATAAGATCACGACATCCTGTTATTCAGATCTGTTTATTCaataaatgcatttaaatgaaGAGGAGACATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65542 True 480 lncRNA 0.36 1 12140935 12141414

Neighbor

gene id symbol gene type direction distance location
LOC120559362 LOC102786474,LOC103354471 coding downstream 21789 12103891 ~ 12119146 (-)
LOC120559249 ptpn1 coding downstream 141490 11986410 ~ 11999445 (-)
LOC120559253 ube2v1,LOC102081483,LOC108249566,LOC101171992,LOC106536681,LOC107391298 coding downstream 183544 11953175 ~ 11957391 (-)
slc52a3 slc52a3 coding downstream 195425 11940260 ~ 11945510 (-)
scrt2 scrt2,LOC108249568,LOC102228875,LOC107391295 coding downstream 233322 11898818 ~ 11907613 (-)
LOC120558333 NA coding upstream 82890 12224304 ~ 12230288 (-)
dnajc5aa dnajc5,LOC104933326,LOC101169856,LOC107090698 coding upstream 91691 12233105 ~ 12237737 (-)
ythdf1 LOC104938233,LOC103354577,LOC106952594,LOC100697389,LOC102786472 coding upstream 118583 12259997 ~ 12270531 (-)
nkain5 LOC103354565,LOC101477820 coding upstream 130073 12271487 ~ 12280037 (-)
uckl1a LOC103355333,LOC101079427,LOC103139074,LOC101476695,LOC102196708,LOC102308715,LOC103385400,LOC101173865 coding upstream 164844 12306258 ~ 12323341 (-)
G49084 NA non-coding downstream 19385 12119658 ~ 12121550 (-)
G49024 NA non-coding downstream 77680 12003267 ~ 12063255 (-)
G48911 NA non-coding downstream 525226 11607970 ~ 11615709 (-)
G48910 ankrd52 non-coding downstream 534321 11605733 ~ 11606614 (-)
G48907 ankrd52 non-coding downstream 540427 11600292 ~ 11600508 (-)
G49112 NA non-coding upstream 5314 12146728 ~ 12147033 (-)
G49118 NA non-coding upstream 70329 12211743 ~ 12213541 (-)
G49115 NA non-coding upstream 101788 12243202 ~ 12244833 (-)
LOC120558423 NA non-coding upstream 210013 12351427 ~ 12368708 (-)
G49178 NA non-coding upstream 230407 12371821 ~ 12373308 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other downstream 12510 12126886 ~ 12128425 (-)
peds1 LOC104919928,LOC103354371 other downstream 161900 11959379 ~ 11979035 (-)
srxn1 srxn1 other downstream 249796 11885965 ~ 11891139 (-)
LOC120558961 NA other downstream 632598 11503827 ~ 11508337 (-)
G48697 NA other downstream 1407048 10641405 ~ 10733887 (-)
dnmt3ba NA other upstream 6000 12147414 ~ 12169209 (-)
ppdpfa LOC104933328,LOC101073585 other upstream 79320 12220734 ~ 12223028 (-)
fkbp1aa LOC100692950,LOC107391264,LOC103354614,LOC101168621 other upstream 247567 12388981 ~ 12391677 (-)
prickle3 prickle3,LOC102790576 other upstream 274189 12415603 ~ 12439909 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other upstream 783044 12924458 ~ 13221338 (-)

Expression


Co-expression Network