G49624 (oard1,LOC106909399)


Basic Information

Item Value
gene id G49624
gene name oard1,LOC106909399
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13655531 ~ 13657376 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66283
TTGATTTTGatgtggaaaaaagaaaatttatttttaagttatctatacatttttttccccccacatgAAAACAGTGCCCACATACTGTGGGAATGATACAGAAAAGTACATACACATAATTACAATAAACCAACTTTTCTATCAATCATCTGCGCTTGTTTTCCTTCATCACTGTGGTCTCTGCTTTCTCAGGGAGGCTGTAGACTGTGATGgagatgtctgtgtgtttgaagACCTGTTCCAGCATCTCTGACACTTTGCTCCACTGCAGTCGATCCAGGCCACAACCAATACGAGGCATTGATATTCTTGTTACTCCGTTGGCTGCACAGTGTGACTTCATGTCCTCCAGGCTCCGTCTCAGGCTGTCATAGGTTGGCTTTTGGCTGGCCTTTTTCTTTGTGATCAGATAGTAGATATAACGTCCGTCTCTTTTTAGTACAGCACATCCCCCTGTCAGCTTTTTCTGTTCCTTTAACTCGTCTACCCCTTTGAACTCCTTCTTGAACATCACTGCTATGCCTGCCCCCATGCGGCAGTCCTCACTGATGCAGTGGGCCAGAGCCTCATCCTTGGGGCAGGAGAACAGGCTCCCAGTGACATAATTCAGTCTCCCGCTGTCTTCTGCAGCCTAGCAAACAGTTGACTGCAGGTGACCGTTTTTAATCCTAAATAAAAGTAGTTTCGGGATGTTTTTTGATAGCTCAGTAGGCTAGTCACTCTGAAGCAGGTAGGAAGCAGCCTCGACATTTGCCTTTCTTCTCGCGAGAAAACAAGAGACTTTGTGGAGGGGCGGTACCTCCTG
>TU66284
TTGATTTTGatgtggaaaaaagaaaatttatttttaagttatctatacatttttttccccccacatgAAAACAGTGCCCACATACTGTGGGAATGATACAGAAAAGTACATACACATAATTACAATAAACCAACTTTTCTATCAATCATCTGCGCTTGTTTTCCTTCATCACTGTGGTCTCTGCTTTCTCAGGGAGGCTGTAGACTGTGATGgagatgtctgtgtgtttgaagACCTGTTCCAGCATCTCTGACACTTTGCTCCACTGCAGTCGATCCAGGCCACAACCAATACGAGGCATTGATATTCTTGTTACTCCGTTGGCTGCACAGTGTGACTTCATGTCCTCCAGGCTCCGTCTCAGGCTGTCATAGGTTGGCTTTTGGCTGGCCTTTTTCTTTGTGATCAGATAGTAGATATAACGTCCGTCTCTTTTTAGTACAGCACATCCCCCTGTCAGCTTTTTCTGTTCCTTTAACTCGTCTACCCCTTTGAACTCCTTCTTGAACATCACTGCTATGCCTGCCCCCATGCGGCAGTCCTCACTGATGCAGTGGGCCAGAGCCTCATCCTTGGGGCAGGAGAACAGGCTCCCAGTGACATAATTCAGTCTCCCGCTGTCTTCTGCAGCCTAGCCAGGAGGGGGCAGCGTTGTACCGTGTGATGAAGCAAACAGTTGACTGCAGGTGACCGTTTTTAATCCTAAATAAAAGTAGTTTCGGGATGTTTTTTGATAGCTCAGTAGGCTAGTCACTCTGAAGCAGGTAGGAAGCAGCCTCGACATTTGCCTTTCTTCTCGCGAGAAAACAAGAGACTTTGTGGAGGGGCGGTACCTCCTG

Function

symbol description
oard1 Predicted to be involved in peptidyl-glutamate ADP-deribosylation. Orthologous to human OARD1 (O-acyl-ADP-ribose deacylase 1).

NR:

description
PREDICTED: O-acetyl-ADP-ribose deacetylase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66283 False 805 lncRNA 0.46 5 13655531 13657376
TU66284 True 839 lncRNA 0.46 5 13655531 13657376

Neighbor

gene id symbol gene type direction distance location
LOC120559297 eif4e3,LOC101063498,LOC104943141 coding downstream 13098 13637063 ~ 13642433 (-)
LOC120559678 LOC102200381 coding downstream 21896 13616876 ~ 13633635 (-)
mdfic2 NA coding downstream 39485 13609317 ~ 13616046 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding downstream 95854 13535401 ~ 13559677 (-)
lmod3 lmod3 coding downstream 120616 13531879 ~ 13534915 (-)
LOC120558698 LOC103355245,LOC104927444,LOC105928575,LOC103467653,LOC107391259,LOC106918288,LOC101471341 coding upstream 67712 13725088 ~ 13739877 (-)
LOC120558999 NA coding upstream 85813 13743189 ~ 13746688 (-)
LOC120558701 LOC106516757,LOC108231961 coding upstream 97553 13754929 ~ 13779091 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding upstream 193070 13850446 ~ 14082805 (-)
LOC120558709 spdef,LOC103372894 coding upstream 527933 14185309 ~ 14193336 (-)
G49514 NA non-coding downstream 222436 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 276668 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 287158 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 297726 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 371281 13281987 ~ 13284250 (-)
G49673 NA non-coding upstream 522964 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 548213 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 551196 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 554834 14212210 ~ 14212497 (-)
G49678 NA non-coding upstream 559644 14217020 ~ 14217510 (-)
LOC120558461 NA other downstream 242353 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 342802 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 401923 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 434193 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 1215622 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 90027 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 382359 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 483004 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 758960 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 874748 14532124 ~ 14534605 (-)

Expression


Co-expression Network