G49673


Basic Information

Item Value
gene id G49673
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14180340 ~ 14184391 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66368
AAAATGTTAACCTGGTTATGTGGATTATGTGTTTGAACCTGCGtgttgtgtatagtgtgtgtttaatgcatgtgtgtttgtatgcatgcgtgtgtatgcgtgcgtgcgtgcgtatatgtgtgtgtgtgtgtgtgtgtgtgcatacgcACATCAAGGATGTTGGACAGTTTTAATGATAGGAGTCCTTTTTGCTATGCTGGACAGCTTTACTCTAAGACACAACTTGTGAGCTGGTGATGTGTTCCTTCTCACGTGTGAGACCCAAACCTGTCACATCCTGTCCCAGACACAGAGCTAAACACATCTGACTGCTGTTGGTCCAGTGAAATTTTAAAACTTCAGGACAACTacgttatatatataaaaagtatcTCTCCCATCTAATCAGAGATTTAGGTGCAACTTAGAGCAAGATAACTCACTAATCAACATCTGATAAATGCAATTTCTGCTATAAATGTAATTCCTATGGAGCAAGTTAAAGACTTTAAAAATAACCAGGTAATGCACTGTGTAAGAGTCAGCTTACATGCAGTGCAGTACTGGTGACAAATGTATTCCCTGTGTCATTGTGCGGTGTTTTGCAGACAAATGCAGTTTGGGTGGATTGGGAAGCAGCTACAAGATGATCCTCACTGAAGCTGTTTGTTATTGCATGGAGAGAAAATGGATAGTTGATGGTATTGGGTCATTCTTTGGCTCAGCAGGGAAAACGGGCCGTATAACTAGTGCTTTTTGCTAGACAGGGCTTTAAGTGACAGTGGAGAACCATGTTTAGACAATATGCCCTCTTTCAAGCCTAAACAGTGGTACATTCACGTCCTGTTGAAGAGGCTTCGATCTTCAGACAACCCTCTGTAGCACAGTAACGCATCAACATGCCTCCAATGGCCCCTCGCTCTGGAAGAAAAGTGACTGGCACAGGTATAGTAAGATGACTTGATCCAGCTTCGCTCTGAGGGAATGTATTACTCGTGTTTCTTGTTAGCAGTAGCGGATTAAAATGACACCTGAATTACTGAACCAAGAATGAAAGCTTCTGCAGAGACAGTGTATCCTTTTTTGTGATGCTAAGAAAAGAAAcatgtcaaaaacaaaacaaagacaacataAAATCACTTCATCAGCAAGCTTCCTTTCATGAAAACAGAAGCATGTCCGGAAGAATGTGATGCTAAAAAGTGAACTCTGCATTTGCAGTTGATGTGTTGCATCAAGTTGTAGCCTCAACGAGGCTGCAGGATTCAGGGAATgcacgttttttttgttttttttttgcatagcaCATGCTGCTATGCAAGTTCAGAAACAGTTAAATCACACATAGCACTACACACACTGGAAAAGAGGTCGGACCAaatcacaaaagaaaaacaaaaaaaaacaagaaaaaaaaaaaaatagaggatACTGTTTGTGGTACTTTTAACACTACACAGCATTCCAGATGTAAGAATGATGACTGACCACACACAGCATTAAAAATGCTACACAAAGATGGCATTACACTGTATATACACAATGCAGGTTAGAGAAGCTCGTCTTGGTCGAATGGGTATAACTGTTTCTATTATCTTCCCATTCTCACATAAGAACAGACTGCAGTGCACTGCAAGTTTAAATAAGCTGCATTATACATTAAATACAGCTACACAGAGAAGCAATGTGTTCCTGCACTGTCTGTCTTGATGTTATAGTTGAGTGTGTATATACTGGAACAACTGCTGctcttgtttttaaatgtgtaggTCCACCCACCACAAATGCTGGATAAAATATATTATACTGATATAATGTCTTTTAGGTTACTAAGTTTTTATCAAGACTGCTTGGCGCATCTGTTGGGCAAGGGATGTGTTGCTCTTAAGTCTCTGGCTATGTGCGGTGCAATTGGACGGGACAGTTCGAGCTGCCTCCAATGGCGTGTCCATGTCCAATAGCGGGACTAGATTGGCTCGACGTAATTGGCCGGGTAAAGTCCCTCTCGGCCGCTGTCCAAGCGACCTCTACACCAGCCTTGCTCATCTTCGTCCTCAGTCTTGGTCAGTTCATCACCTGTGAAGGAGACACCACTCCTTAATCAACACGCAGTTCTGTGTCAAATAGTCAATGTAAATCTAAAATATGAGATATGTGTAAATGCCGCTCCATACtgtctgttgttgttctgtATCGTAGCCAGTATTTTAGAAGTCAACTTCTCCCCCACTCCCAGTACAATTTGACCaggcaacaaaaatgtatatatattatttaagatttggatttttcatattttatctACACACTTCAAGatattgtttgacattttgggagcgTTAGATGAGTACAGTGAATATTACAATAACGTCAGTaacctgttagcttagcttacaACAAAGAGTGGAAACAGAAGAAACAGCTAAGCACCTAGCAgcagcacctttaaagctcactaatttacAAATAAACATGTTTCATGAATAGTTTGCCATGTAACCCCATcaaagaacagcttgtttatttttctaaatgGTCTAAATGTTGTTTCAAAGCCTTCTTCACACTGCTAAGAATAAAACTGTGGCAGGAAAatcaaaacattgtttttgttcttaTTGGCTTAAAAGTATCCAAAAAACGTTTTGGGCATctctgcctttattggataagaaagctgaaatatgaaaggggagagagaggggggaagacatgcaggaaaaccgtcacaggtcagactcaaaccctggaccttctgcgtcgaggaataaacctctgcttatgtgtgcccgctctaccaactgagctaacctgcCACACCAGCCcagctttttttctccaaatctaatgaatttaaattaaacaacTCTGATTAGGCGAGGCCAACCAAATTTCACCCAACAATAAAGGCAAAGTAGATGAAAGGTACCCGGTGAAGCTTTTGGCCCCTAGTGGCCCTATGAAACTATGTTTTTATGAGTGGGCTACCGGTTTTGTTTGTTCACAACAGTTTATGtgaccaacacacacatgcacaagtaCAAGCACATGTGTGACAATTAAATTAACAACATTTCCTGCCAATGGTTTAATACTATTTCACTGATTTTCAGGTGGCGGTAAAGCGCCAACAAAAGCAGCAATGTGCCAACAAAATGATAAAGAAGACGGATTGTAAGTAAACAAGGATGCAAACAATGCAGGTTTGTACAGATTTGAAAAATcggctttgcaaatgttttttgaGGAAAGAAGTGCATTCGACACTTTTGTTTGACTTCAAGGATGCACACCACGAGTTTTGGTGAGTGgcactgtgtgtgagtgacacaCAATGTAAAGAGAAACTTTAATTGTTAAGAAAAGTCTTCAGGGTCCGGGCGTCTGTCATATTAAGTCTTTAAAGACCCTCTGGTCAGATATTCCTAAGATAATTAGAAAACAccttgtggccgggttagctcagttggtagagcaggcgcacgtatatagaggtttactccttgacagGGCGCACACAGGTTCGACTCAGACCTGTGGCTCTTTGCTGCacgtctccctctctctttcatgtcttcatctgtcctgtgaaaataaaggcctaaaaatgccctaAAAAATCAGACCTGAATGCGCAGTACGGGAATCATGAGGAAGATGTACAGCTGTGGCTTCTTCAGTAGTTATTTTTCTGTGTAAAGCTTGTCTTTAAATTGGTTTTCATGCAACTGTGTGGGGCTCTAAAGCACTTTTTCACACCATTTCCAAAAGAGCTTGTGCTAATTGCTGGCAAGTGCCTGTAATTTGTTTTCCATGTGGCTATTATTGACTAAGCACTGCTATCCTCTATAGAGGAAGGGAGCTTTAGAATAGACATTAGGACAGAGTTGGTGATTTTTGAGCACCTGTGTGATGCTACAGCTCAGTCATCTTATCATTTAACTCCTGCCTGCATTGTTCCGGGTCCTTTCTatacattaaaggtgcagtaggtaagtcttataaaactaactttctgtcatatttgctgaaactgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66368 True 4017 lncRNA 0.41 2 14180340 14184391

Neighbor

gene id symbol gene type direction distance location
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding downstream 97535 13850446 ~ 14082805 (-)
LOC120558701 LOC106516757,LOC108231961 coding downstream 401249 13754929 ~ 13779091 (-)
LOC120558999 NA coding downstream 433652 13743189 ~ 13746688 (-)
LOC120558698 LOC103355245,LOC104927444,LOC105928575,LOC103467653,LOC107391259,LOC106918288,LOC101471341 coding downstream 440463 13725088 ~ 13739877 (-)
LOC120559297 eif4e3,LOC101063498,LOC104943141 coding downstream 537907 13637063 ~ 13642433 (-)
LOC120558709 spdef,LOC103372894 coding upstream 918 14185309 ~ 14193336 (-)
LOC120559681 LOC104936655,LOC104942559,LOC101467974,LOC102795863 coding upstream 11091 14195482 ~ 14203960 (-)
taf11 taf11 coding upstream 43979 14228370 ~ 14230406 (-)
si:ch73-217n20.1 NA coding upstream 219627 14404018 ~ 14409405 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding upstream 250854 14435245 ~ 14517114 (-)
G49624 oard1,LOC106909399 non-coding downstream 522964 13655531 ~ 13657376 (-)
G49514 NA non-coding downstream 747245 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 801477 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 811967 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 822535 13355117 ~ 13357805 (-)
G49675 NA non-coding upstream 21198 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 24181 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 27819 14212210 ~ 14212497 (-)
G49678 NA non-coding upstream 32629 14217020 ~ 14217510 (-)
G49679 uhrf1bp1 non-coding upstream 33256 14217647 ~ 14218807 (-)
LOC120558710 NA other downstream 35118 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 54517 14039735 ~ 14125823 (-)
zgc:66479 NA other downstream 426474 13747403 ~ 13753866 (-)
LOC120558461 NA other downstream 767162 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 867611 13308360 ~ 13312729 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 231945 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 347733 14532124 ~ 14534605 (-)
map3k12 LOC104930685,LOC103358642 other upstream 355397 14539788 ~ 14551558 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 660947 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 2096653 16281044 ~ 16283856 (-)

Expression


Co-expression Network