G49680


Basic Information

Item Value
gene id G49680
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14218972 ~ 14219179 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66376
AGTCCATGAGAACAACAAAATTGTCGCTGACATCACTGTCCACAGAGAGATATTCGTCAGGCAGGCTGCCATCCAAGATAGCACTATCAAAGGAATGCTGGGAAGGCGACTGCTTCATGGATTGGTGGCGCAGGCTGGCAGCCAGAGAGGGGGAGGACTCTTCTGAACGCTGGACCTGTTCCCTaggaacacaaacaaacaaacaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66376 True 208 lncRNA 0.51 1 14218972 14219179

Neighbor

gene id symbol gene type direction distance location
LOC120559681 LOC104936655,LOC104942559,LOC101467974,LOC102795863 coding downstream 15012 14195482 ~ 14203960 (-)
LOC120558709 spdef,LOC103372894 coding downstream 25636 14185309 ~ 14193336 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding downstream 136167 13850446 ~ 14082805 (-)
LOC120558701 LOC106516757,LOC108231961 coding downstream 439881 13754929 ~ 13779091 (-)
LOC120558999 NA coding downstream 472284 13743189 ~ 13746688 (-)
taf11 taf11 coding upstream 9191 14228370 ~ 14230406 (-)
si:ch73-217n20.1 NA coding upstream 184839 14404018 ~ 14409405 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding upstream 216066 14435245 ~ 14517114 (-)
col2a1a LOC103358639 coding upstream 346638 14565817 ~ 14590838 (-)
spryd4 spryd4 coding upstream 397432 14616611 ~ 14620139 (-)
G49679 uhrf1bp1 non-coding downstream 165 14217647 ~ 14218807 (-)
G49678 NA non-coding downstream 1462 14217020 ~ 14217510 (-)
G49677 NA non-coding downstream 6475 14212210 ~ 14212497 (-)
G49676 NA non-coding downstream 10120 14208572 ~ 14208852 (-)
G49675 NA non-coding downstream 13148 14205589 ~ 14205824 (-)
G49681 NA non-coding upstream 331 14219510 ~ 14219780 (-)
G49682 uhrf1bp1 non-coding upstream 1038 14220217 ~ 14220618 (-)
G49716 NA non-coding upstream 180836 14400015 ~ 14402630 (-)
G49739 NA non-coding upstream 183531 14402710 ~ 14403787 (-)
G49801 NA non-coding upstream 450274 14669453 ~ 14672001 (-)
LOC120558710 NA other downstream 73750 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 93149 14039735 ~ 14125823 (-)
zgc:66479 NA other downstream 465106 13747403 ~ 13753866 (-)
LOC120558461 NA other downstream 805794 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 906243 13308360 ~ 13312729 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 197157 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 312945 14532124 ~ 14534605 (-)
map3k12 LOC104930685,LOC103358642 other upstream 320609 14539788 ~ 14551558 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 626159 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 2061865 16281044 ~ 16283856 (-)

Expression


Co-expression Network