G49801


Basic Information

Item Value
gene id G49801
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14669453 ~ 14672001 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66554
TGAATAAAAGTAACATAAAGTTAGCATTTAATCTCTAATATAACAACTGCTTTAAGttcataatttatttatatatcacCAGACTAAAATAATCATCCTTTCATacatcaaaatgaaaatgaaaattttaaaatggaggcaaaaataaaacaaaacctgAAAGCATGGCGGCCAGAGGACTTGTATTGAGATGCATGAGCTCATGCAGTGGATGCTGGAAATCACTCCAGCTGTTAATTTTTATTTACTGACAAATACAGTAGAAGCATAATTAAATTTTTGATAAATATACTTTTGATAAAGAAAACCTACAATCATATGCACAGAAAAAGAGACACAGCTAAATACAAGTACAACATTACACAGATAAGACTATGATAATACCGTAAGATTATTAGCCAATATTTACATTGCATTACAGTTGATGGTATGATTGTGCTTGATAATAACACTTCACAGCTAAGCTATACAATTCCCATTTCCTGCTAAGAATATCATTGAGCCCATTGGGAATAAGTGCAAGTAGATTAATGCCAAAAGAATATTGTTTGATTTCTGTCAACAGAGTCAAATTAGACACGGAATAAACATGCACCGCCAGAGCTGACATGTTTACAGACTAACTGATAACAAATACAGTGTTTTGGATATGAGGGCAGAATTCCGAATTTTTCCTTCATCAGCTTCTGAATTtggtgcacacacacgcacaaataaatacatgctcACGGGATTCAACCATGTTCATCGATGGACCACATTTAAGACGCCTGCTAGTGCTGCTATACATGCAACTTAGAGCCCTAGAAGACACATTCAACATTCTCATTAATTTTATCTTACCGAATGTAAATTCCCTTAAATGTGAAGAACAGCATCTACGTACATGTACAAATGTACGACAGCCCCTTAAATAATAACCTTTTTTAAATCTTGTCAGTAAATACGAGGGACAGTGATTGTCATTATAAGGGAATTTGAAGGCAAATTAGATAGTATGTAGCACCACATGGAAAAGggctttttaaacatttgtttataatatgttttttgtgcatttaattttgttgctgtgtatccatccatcttttTCATCTTAAAGTTCTTGTTGTAGCTCATTTAACTTTAGGTTCTTCATAATACTAAGTGTTTAAATCAAAAGTTCAAAATGTTGGGAAATACATCCTTTTGCTCTCTAGTGGAGACAGATGAGacgattgataccactcttttatgagagtggtatcaatcttctcatcttctCATCTCTCTGCCAGAAAGCTAATAAGCTCATTTCCCAAATGTCAAACTCTTTTTCTTatggaggggcccagaattttgtgctacgcccctggtcCCTGTAAAAGTTGTGACAGTGTGACatcattaatttaattatttacacCTTTGAtattcctactgtgacatgtcaaaatgtcttctgttaAAAAGACCTCTGACTGTTGCTCAGCAACTGTTACGCGGACTCGCTTTAAGGCcagatgtttttttcaacctattctgccgacaggacagatgaagacatgaaaggggagagagagagagagagagagagagggaacaacatgcagcaaagggctgaggtcagagtcaaaccctgCACCACTGCATCGAggactaaacctctatatacgtgcgcctgctctaccaactgcgCTATCTGGGCACACATTCTGCTCATTTCTAAACATGgaaattacctttttttttattaataatttgcTGTAAATTATTAAGGGCGCTGCCCCCCTACAAGATGAGGTAATAGAGTATATTGGCAAAATGCTCAGGTTTTAACAAGAAAAGACATGGATAAAGTCGGATGACATGAATATAAAAATAGAAAGTTGGTGGAAAAGTCGAGCACAAAAGGGTGATGAAAGCAAACCTCAAATGCAAAAGTGAAAAGAATGTGCAGCACTGACattcaaatacttaaaaaaataaaataataaataacattttgtgagttaaaaaaagaaaactttcaCATCAATTATTTTACAAAGACATCCTTCAGATTGACAAATGACAAACACCACCACACAGCTGGGAATTCTAATGCTGATTTACTGAACACATATAAACCTCAGCTCAGTTAATGCTCCCATTTACTGTAACTGTTACTTAGTCTTGAGAAGCTGTTTACAGATGACCATGCACTTATTCAGACATTTATGAATTCGTCACGTTCTGCTGTCCTGCTGTCTGTGTTGCTTCTCCTCACTTCAGCCACATGCTGTTTCCACAAACCGTTACCAGGCACAGTTGAAGACACTTTGCTCTGTTTGCTCCTGCAGTCTGAAAAACTGCAACGCACAAAGTCGATGAAAGCACTCAGAGACGAGAGAGTGCAGCGGCTCCCTCCTCGCGGCTACAGAGGCCTAATGAAAGTTGCTGACGTGACACTTGACGTCGTCTAAGCTCAGGACCGTCCCCTggtcgttgttgttgttgttgttgttgtgcttCTTATCGGAGCAGCGACACAACTTGTACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66554 True 2523 lncRNA 0.37 2 14669453 14672001

Neighbor

gene id symbol gene type direction distance location
spryd4 spryd4 coding downstream 49314 14616611 ~ 14620139 (-)
col2a1a LOC103358639 coding downstream 78615 14565817 ~ 14590838 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding downstream 152339 14435245 ~ 14517114 (-)
si:ch73-217n20.1 NA coding downstream 260048 14404018 ~ 14409405 (-)
taf11 taf11 coding downstream 439047 14228370 ~ 14230406 (-)
LOC120559225 g6pd,LOC104919647,LOC107391210 coding upstream 13044 14685045 ~ 14698017 (-)
LOC120558823 adcy6,LOC107094831 coding upstream 35417 14707418 ~ 14750021 (-)
ddx23 ddx23 coding upstream 133104 14805105 ~ 14814207 (-)
LOC120559665 rnd1,LOC104919641,LOC101482985,LOC103358630 coding upstream 151705 14823706 ~ 14833931 (-)
LOC120559597 LOC103373045,LOC100705386,LOC101481619,LOC102789314 coding upstream 233050 14905051 ~ 14920772 (-)
G49739 NA non-coding downstream 265666 14402710 ~ 14403787 (-)
G49716 NA non-coding downstream 266823 14400015 ~ 14402630 (-)
G49682 uhrf1bp1 non-coding downstream 448835 14220217 ~ 14220618 (-)
G49681 NA non-coding downstream 449673 14219510 ~ 14219780 (-)
G49680 NA non-coding downstream 450274 14218972 ~ 14219179 (-)
G49802 NA non-coding upstream 1627 14673628 ~ 14673848 (-)
G49807 NA non-coding upstream 10709 14682710 ~ 14683985 (-)
G49862 ptges3,LOC102790477 non-coding upstream 190794 14862795 ~ 14865747 (-)
G49876 baz2a,LOC102790184 non-coding upstream 212145 14884146 ~ 14885386 (-)
G49878 NA non-coding upstream 216774 14888775 ~ 14889514 (-)
map3k12 LOC104930685,LOC103358642 other downstream 117895 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 134848 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 236459 14416336 ~ 14432994 (-)
LOC120558710 NA other downstream 524231 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 543630 14039735 ~ 14125823 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 173337 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 1609043 16281044 ~ 16283856 (-)
LOC120559328 smim4 other upstream 2434833 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 3016114 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 3163079 17835080 ~ 17895082 (-)

Expression


Co-expression Network