G49807


Basic Information

Item Value
gene id G49807
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14682710 ~ 14683985 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66562
ACAGACAAATGTTGACATTATTTAACACATTAGCCATAACAGTGAAAACGATGTCAGTCAGGGTCACAACAACAAATGGAATAGTGGACGGATGTTAAGTAGTTAAGTCTTTGGTTTGACAAGAAAAGACAATGGCTAGACTTAGCAACCGTGCATTCTAAGGCACTTGCATTACTTTTTGTTAAAAACAGTTGCTGTGCGATCAACAGTatgttaatatacagtacaggacaAGAAAAACCATAGTGAATTTTGTAAGACACTTTagagcacacacaaataattaAGTGAGGTATTACATATATAATTAAAGAACTTGTCATGCTGGACAAGCATTCACTAGACGGCAACGACGTTAGATACTAATAAGTCCCTCTACAGACAGCTGTTTCTTTGCCCTGAGTGGTTGGCCCTGCCAAAATCTGAATGCATGATGAAGTGCCATTAAAAACATTGTACAAATGTTACTAACTGAATGGCAGTCAAGGGTTGACTAAAACAGGAGTCaaacgtttttaaaaactgttatTGAATTCTCATTTTGACATCCAGTCAAGTCTGGATTTCTTTAGTGTTTTCAATTCTGCTACGGTCTAGAAAAGTGATACCATGCGTTcggattttgaaaaaaaaatctcggGCAAAAACAGCTATCTGACCATCGCAAGGGGAAAGAAAATCCTTCAACAATGATCCTTcaagtttcatgtaaatgtcaggaaataaaaaaaagcacttaAAAGAAACCCAGTGTTAAGGACAAAGTGGTAAAACGAGAGCTGAACGCACAGATGTTATGCAACCTCTCCAAAGAGTGAACATGAATTGCGCTCACTGGCTGGAGCCCTTTTAGTTGCATGACAGCTGTGGAGTGACTGGTCATCCCCCGTCTATTTCTGATGGGTAACAGGTGAGAACTGGTAATGGTTTCCATTTAGAAGGCACTTGGtcagtttgttgtttttcacatGTGCTCTGGGTGGTTCTGCAAACAGCTTATGAACTCTGTGACTGGATGGCCCTGATAGCAGATCTGATACACTGCATTGAACAGTGGGAACTTGTCAATTAGGTTTTTGTGCTTGAGGATGAGATAGACCTCGGCTGCTGTCGCTGGTCCCTGCAGCTTCTGACCGTTCAGCATCTCTTTCTCCAGCTCCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66562 True 1163 lncRNA 0.40 2 14682710 14683985

Neighbor

gene id symbol gene type direction distance location
spryd4 spryd4 coding downstream 62571 14616611 ~ 14620139 (-)
col2a1a LOC103358639 coding downstream 91872 14565817 ~ 14590838 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding downstream 165596 14435245 ~ 14517114 (-)
si:ch73-217n20.1 NA coding downstream 273305 14404018 ~ 14409405 (-)
taf11 taf11 coding downstream 452304 14228370 ~ 14230406 (-)
LOC120559225 g6pd,LOC104919647,LOC107391210 coding upstream 1060 14685045 ~ 14698017 (-)
LOC120558823 adcy6,LOC107094831 coding upstream 23433 14707418 ~ 14750021 (-)
ddx23 ddx23 coding upstream 121120 14805105 ~ 14814207 (-)
LOC120559665 rnd1,LOC104919641,LOC101482985,LOC103358630 coding upstream 139721 14823706 ~ 14833931 (-)
LOC120559597 LOC103373045,LOC100705386,LOC101481619,LOC102789314 coding upstream 221066 14905051 ~ 14920772 (-)
G49802 NA non-coding downstream 8862 14673628 ~ 14673848 (-)
G49801 NA non-coding downstream 10709 14669453 ~ 14672001 (-)
G49739 NA non-coding downstream 278923 14402710 ~ 14403787 (-)
G49716 NA non-coding downstream 280080 14400015 ~ 14402630 (-)
G49682 uhrf1bp1 non-coding downstream 462092 14220217 ~ 14220618 (-)
G49862 ptges3,LOC102790477 non-coding upstream 178810 14862795 ~ 14865747 (-)
G49876 baz2a,LOC102790184 non-coding upstream 200161 14884146 ~ 14885386 (-)
G49878 NA non-coding upstream 204790 14888775 ~ 14889514 (-)
G49882 mip,LOC106516764,LOC103373044,LOC108231939 non-coding upstream 218104 14902089 ~ 14902859 (-)
G49977 tcfl5 non-coding upstream 387852 15071837 ~ 15073424 (-)
map3k12 LOC104930685,LOC103358642 other downstream 131152 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 148105 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 249716 14416336 ~ 14432994 (-)
LOC120558710 NA other downstream 537488 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 556887 14039735 ~ 14125823 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 161353 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 1597059 16281044 ~ 16283856 (-)
LOC120559328 smim4 other upstream 2422849 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 3004130 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 3151095 17835080 ~ 17895082 (-)

Expression


Co-expression Network