G50104


Basic Information

Item Value
gene id G50104
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15685011 ~ 15688427 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66923
aaaaaaaaaaaaaagaaaaaaatatgtcCTTCATACAGTGACAGAGCTGCTTTTGCTGATATGGGTAAAAGTCCCATTTGTTACACCCAAAGAAGCCATCATTGGAGGATGGGGTTGCTTTAGCACCTTGTTATCAAACTGCCCTTTACAGCTGTCCACTCCTGGCTCTGTAAGATAGAGTCTGAGCAGTGCCCCATCCTCTTCGTCCAGTGTAGCCACCTCTGAAGCCTTGGCCCCTCAGGAACCGTCCAGGGACCCCAAAAGTCTCCAGATTGCGCTTCCGCTCCTCCGCCCATGTTAGTCTGAAACAAACAGAGGCACTGAACTTATTCTCAGATGAGATGTTGTCAAAGAAAGACTTCGCTTTGTCATAGTAGCATTTTGGTCCAAAATGATCATCCTCTGCAGTTGAGTGCATTTCTTTCTCTACCTTGTGGTTTCCATCTGTAAACAGAAATATGCACTGCACATAACCTGGAAGGATGCGCTATAAAAGACCAAGCTGAAAGTGTTGAAAACATAGGTTAAAAAGCAGATTCACCAGTTTTCAACTCATGCCCATCTATTCACAAACCTAGAcccaaaaatacatatttttcctcttacctgtagtgcCATTTAGCAATCTAGATCGTTTTGGTGAGTTTCCCAGTGTTGAAGATATCGTCCGTAGAGATGTCTACAGAACGATATCACTGCACAGAAGGAAGCATAGATGTAAGAATTAATGGCGTCCTACTAGCTCATGTGAGCCAGCCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66923 True 762 lncRNA 0.43 3 15685011 15688427

Neighbor

gene id symbol gene type direction distance location
LOC120558694 taf4 coding downstream 3296 15667178 ~ 15681715 (-)
ogfr NA coding downstream 583111 15095189 ~ 15101900 (-)
col9a3 NA coding downstream 590973 15076829 ~ 15094038 (-)
zgc:113278 LOC104951675,LOC103357347,LOC102293950,LOC100706617,LOC102213464 coding downstream 674016 15001961 ~ 15010995 (-)
LOC120559456 ncoa3,LOC104951720,LOC104919659,LOC100705914,LOC103373047,LOC102789026 coding downstream 693121 14926288 ~ 14991890 (-)
LOC120559538 NA coding upstream 27192 15715619 ~ 15724180 (-)
cdh26.1 NA coding upstream 38773 15727200 ~ 15738542 (-)
LOC120559871 LOC104919620,LOC103370834 coding upstream 52789 15741216 ~ 15757208 (-)
irf10 LOC104919618,LOC103370835 coding upstream 103751 15792178 ~ 15798489 (-)
bmp7b LOC103370837,LOC104958733 coding upstream 111513 15799940 ~ 15823806 (-)
G50101 NA non-coding downstream 19903 15664770 ~ 15665108 (-)
G50006 NA non-coding downstream 363090 15321709 ~ 15321921 (-)
G50005 NA non-coding downstream 365166 15319406 ~ 15319845 (-)
G50004 NA non-coding downstream 382374 15302398 ~ 15302637 (-)
G49991 NA non-coding downstream 466448 15218061 ~ 15218563 (-)
G50136 NA non-coding upstream 190907 15879334 ~ 15896000 (-)
G50138 LOC104940213,LOC103368778,LOC102235665 non-coding upstream 198463 15886890 ~ 15890117 (-)
G50153 LOC101174347 non-coding upstream 241694 15930121 ~ 15933298 (-)
G50143 NA non-coding upstream 264103 15952530 ~ 15956672 (-)
G50230 NA non-coding upstream 597894 16286321 ~ 16379623 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 831194 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 1133453 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 1150406 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 1252017 14416336 ~ 14432994 (-)
LOC120558710 NA other downstream 1539789 14140380 ~ 14145222 (-)
G50217 fgd3,LOC104966710 other upstream 592617 16281044 ~ 16283856 (-)
LOC120559328 smim4 other upstream 1418407 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 1999688 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 2146653 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 2285866 17974293 ~ 18101572 (-)

Expression


Co-expression Network