G50371


Basic Information

Item Value
gene id G50371
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16580076 ~ 16580982 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67316
cgttataccaaggagctgttttccttcgcttcatcgtcttctttttgagaggagcgacagagtccaaggtcgtccgtaggcaagtcgcagcaccgtccacaaatgcatcaacccgagagggactgaggttaacatagaggtcctctgttattctaaggcacgacatagagtcaaatgctgttgtaatatcttccttaaatttagctatagcactgtcagataggcatctagtgtagaagcctttatctagtttagtatggtcaggtagcaagaattcaaaagtaattaaaaaatgatctgataataccaaattctgcggaaatattattaaatcctcaatctcaataccatatgccagcacaaggtcgagggtgtggttaaaacagtgcgtcgccttgtgcacagtctgactgaaaccgattgaatccagtaatgtgttgaaagcagtagtaaggctattgctgtcaacgtccacatggatattaaaatcacctacaataagtactttgtctgatttaaggactacacttgataaaaactctgagaattcagataaaaattcagaatacggacctggagctcggtagacaacaacaaatataattggctgttctgatttccatgttggatgttcgagattaagaacaaggctttcaaaagagttataattcagtttgggtttaggattaattaacaggattgaatcaaatatggctgcaactccccctcctcggcctgagcctctaggaatttgagtattaatatgactgggaggagtcgcttcatttagactaacatattcttcatggcccagccatgtttcagtaagacagaatagatcaatttgattatcagatatcaattcatttactagtgctgctttagaagacagagatctgatatttag

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03030 DNA replication

RNA

RNA id representative length rna type GC content exon number start site end site
TU67316 True 907 lncRNA 0.39 1 16580076 16580982

Neighbor

gene id symbol gene type direction distance location
tmcc1a tmcc1,LOC102793771 coding downstream 2990 16528518 ~ 16577086 (-)
plxnd1 plxnd1 coding downstream 53424 16460250 ~ 16526652 (-)
mbd4 mbd4 coding downstream 150511 16426070 ~ 16429565 (-)
LOC120558718 LOC104966685,LOC103361981,LOC102294611,LOC102076950,LOC102210297 coding downstream 154129 16424220 ~ 16425947 (-)
ptpdc1b LOC103361997,LOC104940250,LOC102303597,LOC101466018,LOC102203312 coding downstream 407044 16166305 ~ 16173032 (-)
mrps25 mrps25 coding upstream 45145 16626127 ~ 16628418 (-)
nr2c2 nr2c2 coding upstream 49590 16630572 ~ 16643870 (-)
wdr46 wdr46 coding upstream 68915 16649897 ~ 16658802 (-)
LOC120559001 prrt3 coding upstream 104325 16685307 ~ 16706539 (-)
ogg1 ogg1 coding upstream 125169 16706151 ~ 16709769 (-)
G50278 NA non-coding downstream 161463 16416921 ~ 16418613 (-)
G50230 NA non-coding downstream 200453 16286321 ~ 16379623 (-)
G50143 NA non-coding downstream 623404 15952530 ~ 15956672 (-)
G50153 LOC101174347 non-coding downstream 646778 15930121 ~ 15933298 (-)
G50136 NA non-coding downstream 684076 15879334 ~ 15896000 (-)
G50378 NA non-coding upstream 80016 16660998 ~ 16663045 (-)
G50382 NA non-coding upstream 85068 16666050 ~ 16679676 (-)
G50389 qars non-coding upstream 133079 16714061 ~ 16714748 (-)
G50443 NA non-coding upstream 363789 16944771 ~ 16944972 (-)
G50476 NA non-coding upstream 482836 17063818 ~ 17064746 (-)
G50217 fgd3,LOC104966710 other downstream 296220 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 1726259 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2028518 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2045471 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 2147082 14416336 ~ 14432994 (-)
LOC120559328 smim4 other upstream 525852 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 1107133 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 1254098 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 1393311 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 2293773 18874755 ~ 18886895 (-)

Expression


Co-expression Network