G50378


Basic Information

Item Value
gene id G50378
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16660998 ~ 16663045 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67324
cataacaagaatagcatgtatagttatctttattgaagtgaattaggttcaaatcaccgacatgcatgaatgatatttttgtagttttacacataataatccacgatgatcacatgacaaaaaactgaaattgcacgtcaaaatgacacattgtcaatatttttagagaccccccaaaatttcacaaatcacgttttcaggggagcccatgtcttattaaggggagccgagctccccctagctcccccgtagttcgcaccctgactgtactctgcctttgtatcatgtgccaaaaacaaggagtcgtgcaaaggcaaaagacagtaactgacatataatcaatatttgcttGCTGTTCACCATACTTACATCCATAATAAGAACACCTAACCAAGGTCTAGTCatcatggtatttgttttaaattatatagaagACATTTGGTTGTTCCTATTTACTGCTATAATGATCAGGATAGTGTGGCAACActatttcttgtatttattcatactgtacactgtatctgtgtcatattctcattaagggctgagcccccctaaaggtctgatcaaGATGCACAGTCAACGAACTCGACTTGGATTACTAGgctactttttaattctgagaTAACATTTAGATTAGCATACTTTGTACGTACGTTAACAATAACTAGCTTAGTGCTTTTATGGATTTGTGTAAGATTTGACATGAACAACTGCAAGAAGGAAATATGGCTCAAACACGTATGGATTGTTGTGGATACAGCAAATGACGTGCTTTGCTATGGATTATATCTTCCATGGATTAAATCGGATTGCATGGAAAGGAAGGATGCCTGTGTATTTAATGATTTGTTTTCGGCGTCTGATGTGAGGCTCCGCCAAGTGAGGAGGTGTGTCAGCGAGCGCTACGTGATAAAGTTAGCTAGCTCCGGGCTGTCACTGACACTGACAGAATAGGAATCATCACCACTTTATTTGAAAGATATGTCGTGTGTATGTTACGTGGTTTGGTGACAATTAAAAGCGGCAAACTTTGGCAGTATGACGAGGCCAGAGTACAGTAACATCTCTCTTGATGCCTGGCTAAACAAAGTCAGAACACCTTAACTCAACTTCAGCGTGGCCAGAACAAAGGCAAAGAgccgtaacagctgttacgtatTGTTCAAGGCTGTTTAGATCTGTGACATTTCCTTTATGTGCTTATTTGTTTAGACAaaatcatccattcatccatgcatccatccatccattattCACCTGCAACCAATGTAAACCTTTCCCTGCCTTGACAACAATAAACCCTTGGAACGGCACtgtgtttgaatgtgcacaCCACATCagatgttcagtgaaccaacacCATCAGTGTATAAGAGTTTCTACAACGGCGTTCTGCTGTGGTTTCTCGTATAGTTTTGGATGTTACGGTTGTCATAGCCCTTTATTTTCTcgttaaaacaatcaaattgaCTCACGATATTTATTCACATGATAAAGGAGGTCTCAAATACCCCAAAAGTGACATTAACTCATTTTTGCCCAAACATGATGTTACTGCGTtttgcctttgtagggcagtaTACACATATCTTTTATGAGCTCATAAAGCATTTATCTTTGCTGTTTATGTTCATGGACTGACCTGCTTTCGGGTATGTTGCAATAAGTATATCATCTGGCCTGGCCTGAAAGTTTTGAATGTTCTCCCAGTTGTCTGTGAAAAAGTGAGTCATTGAGACGCCATGGAAATCAAAGATTTCTGGTCGAGAGATcttaatgaaaaaaagagagagagaaaagaattgTAAATCAAAGCATATGATCATTGTGTGCGAGTAATTGAACTGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67324 True 1854 lncRNA 0.39 2 16660998 16663045

Neighbor

gene id symbol gene type direction distance location
wdr46 wdr46 coding downstream 2196 16649897 ~ 16658802 (-)
nr2c2 nr2c2 coding downstream 17128 16630572 ~ 16643870 (-)
mrps25 mrps25 coding downstream 32580 16626127 ~ 16628418 (-)
tmcc1a tmcc1,LOC102793771 coding downstream 83912 16528518 ~ 16577086 (-)
plxnd1 plxnd1 coding downstream 134346 16460250 ~ 16526652 (-)
LOC120559001 prrt3 coding upstream 22262 16685307 ~ 16706539 (-)
ogg1 ogg1 coding upstream 43106 16706151 ~ 16709769 (-)
LOC120559488 LOC104953760,LOC102798642,LOC101474932 coding upstream 62932 16725977 ~ 16730653 (-)
LOC120559825 LOC103362962 coding upstream 83334 16746379 ~ 16789963 (-)
LOC120559618 magi1,LOC104927908,LOC103368435,LOC102193390,LOC102291253 coding upstream 160729 16823774 ~ 16916382 (-)
G50371 NA non-coding downstream 80016 16580076 ~ 16580982 (-)
G50278 NA non-coding downstream 242385 16416921 ~ 16418613 (-)
G50230 NA non-coding downstream 281375 16286321 ~ 16379623 (-)
G50143 NA non-coding downstream 704326 15952530 ~ 15956672 (-)
G50153 LOC101174347 non-coding downstream 727700 15930121 ~ 15933298 (-)
G50382 NA non-coding upstream 3005 16666050 ~ 16679676 (-)
G50389 qars non-coding upstream 51016 16714061 ~ 16714748 (-)
G50443 NA non-coding upstream 281726 16944771 ~ 16944972 (-)
G50476 NA non-coding upstream 400773 17063818 ~ 17064746 (-)
G50477 NA non-coding upstream 401952 17064997 ~ 17065274 (-)
G50217 fgd3,LOC104966710 other downstream 377142 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 1807181 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2109440 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2126393 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 2228004 14416336 ~ 14432994 (-)
LOC120559328 smim4 other upstream 443789 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 1025070 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 1172035 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 1311248 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 2211710 18874755 ~ 18886895 (-)

Expression


Co-expression Network