G50443


Basic Information

Item Value
gene id G50443
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16944771 ~ 16944972 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67417
aatttcgtcacgccacttatataacatcattccccaatgtattataaagctaaccgttgtgtccgatttgattttaaggcatttttatgaacgcgaggcgtctttgtaggaaagcagctgcttgctatatgtcccattcattacaatggggaaataccgcagctagctagctacacttttgccataactaaattatatttac

Function

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0007215 glutamate receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67417 True 202 lncRNA 0.38 1 16944771 16944972

Neighbor

gene id symbol gene type direction distance location
LOC120559618 magi1,LOC104927908,LOC103368435,LOC102193390,LOC102291253 coding downstream 28389 16823774 ~ 16916382 (-)
LOC120559825 LOC103362962 coding downstream 154808 16746379 ~ 16789963 (-)
LOC120559488 LOC104953760,LOC102798642,LOC101474932 coding downstream 214118 16725977 ~ 16730653 (-)
ogg1 ogg1 coding downstream 235002 16706151 ~ 16709769 (-)
LOC120559001 prrt3 coding downstream 238232 16685307 ~ 16706539 (-)
fmodb fmod coding upstream 9913 16954885 ~ 16959681 (-)
LOC120559259 LOC104927913,LOC103374533,LOC104956322,LOC106571864 coding upstream 16526 16961498 ~ 16972293 (-)
LOC120559002 NA coding upstream 55429 17000401 ~ 17001309 (-)
pabpc1l LOC104935356,LOC100697848,LOC102784553,LOC102215180,LOC101469158,LOC102298035 coding upstream 135267 17080239 ~ 17098500 (-)
LOC120558578 LOC103467546,LOC102230394,LOC106947997,LOC105927130,LOC103145058,LOC101167287,LOC104935375 coding upstream 153653 17098625 ~ 17104961 (-)
G50389 qars non-coding downstream 230023 16714061 ~ 16714748 (-)
G50382 NA non-coding downstream 265095 16666050 ~ 16679676 (-)
G50378 NA non-coding downstream 281726 16660998 ~ 16663045 (-)
G50371 NA non-coding downstream 363789 16580076 ~ 16580982 (-)
G50278 NA non-coding downstream 526158 16416921 ~ 16418613 (-)
G50476 NA non-coding upstream 118846 17063818 ~ 17064746 (-)
G50477 NA non-coding upstream 120025 17064997 ~ 17065274 (-)
G50483 rbm39 non-coding upstream 126150 17071122 ~ 17074733 (-)
G50484 rbm39,LOC103373755 non-coding upstream 129903 17074875 ~ 17079295 (-)
G50548 NA non-coding upstream 203234 17148206 ~ 17150051 (-)
G50217 fgd3,LOC104966710 other downstream 660915 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2090954 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2393213 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2410166 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 2511777 14416336 ~ 14432994 (-)
LOC120559328 smim4 other upstream 161862 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 743143 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 890108 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 1029321 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1929783 18874755 ~ 18886895 (-)

Expression


Co-expression Network