G50574


Basic Information

Item Value
gene id G50574
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17250650 ~ 17251274 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67638
CATTTATTAAAATTAATGAAATACTGCAAAGCTAATATTACATATGTTTGTCTCACAAAATTCTTCACATTTAATGATTACTTGCATTCAcataaaactaaattattttgcCATGAGAGCAAACTGATTAGGTGCAAATACATGTTACAAAAAAATCactgttgtatgtatgtaaaagCATCGACTTCAGGGAATATAGTAGGATTATGGTTTATACAGTGTCAATAAGCAATTATTTTCTGTGTGGCATGCATAGAAATggcacaaaacaataaaaatgatttccCAAACATTAGTTatcttgtatatatatatatagggaacTGCCCAGTAAGCAGCTATTGCAATTACATCACAGAACAGCAACAGGTAGCAGGATAGTCATCTGCACTAACTTTGAACTCATTCCCGTAAACAAAGTAAACGTGTGATTTCCCTTTCCACAAGTAGGTAACCTTGGTGATGGGGATCAGCTCTATGGTTTGACGCTGCAGACAAAGAGAGCAAATATGAGCAtgttacacaaacacaaaattagGCTTGGGTTACAAGTACTGTCCAG

Function

NR:

description
PREDICTED: calpain-1 catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67638 True 562 lncRNA 0.34 2 17250650 17251274

Neighbor

gene id symbol gene type direction distance location
rpl32 rpl32 coding downstream 4447 17242880 ~ 17246203 (-)
LOC120558336 LOC103354442 coding downstream 9907 17209216 ~ 17240743 (-)
LOC120559621 LOC104935447 coding downstream 88602 17158804 ~ 17162048 (-)
si:ch73-233m11.2 NA coding downstream 93100 17153488 ~ 17157550 (-)
slmapb LOC103354436,LOC104935421 coding downstream 108706 17130282 ~ 17141944 (-)
LOC120559574 LOC104961988,LOC104935553,LOC102207720,LOC101165305 coding upstream 73933 17325207 ~ 17358698 (-)
LOC120559199 grm7,LOC104935569,LOC103354449,LOC101484945 coding upstream 153828 17405102 ~ 17520570 (-)
tasorb LOC103354451 coding upstream 270654 17521928 ~ 17542122 (-)
asb14b LOC100700796,LOC102307994,LOC103354452,LOC102775635,LOC102205832,LOC101483549 coding upstream 291325 17542599 ~ 17546306 (-)
dnah12 dnah12 coding upstream 295929 17547203 ~ 17572201 (-)
G50561 NA non-coding downstream 45021 17203747 ~ 17205629 (-)
G50567 slc6a6,LOC106905582,LOC103145023,LOC101165803 non-coding downstream 57015 17190077 ~ 17193635 (-)
G50553 NA non-coding downstream 97223 17152200 ~ 17153427 (-)
G50549 NA non-coding downstream 98712 17151317 ~ 17151938 (-)
G50548 NA non-coding downstream 100599 17148206 ~ 17150051 (-)
G50647 NA non-coding upstream 218933 17470207 ~ 17470675 (-)
G50709 NA non-coding upstream 431774 17683048 ~ 17683519 (-)
G50779 LOC102310871,LOC107096010,LOC102797073 non-coding upstream 531414 17782688 ~ 17786360 (-)
G50803 prpf6,LOC107673318,LOC102793577 non-coding upstream 789135 18040409 ~ 18041404 (-)
G50808 NA non-coding upstream 802745 18054019 ~ 18057349 (-)
LOC120559328 smim4 other downstream 135603 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 966794 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2396833 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2699092 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2716045 14532124 ~ 14534605 (-)
G50712 birc7 other upstream 436841 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 583806 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 723019 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1623481 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 1694694 18945968 ~ 19077781 (-)

Expression


Co-expression Network