G50709


Basic Information

Item Value
gene id G50709
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17683048 ~ 17683519 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67797
taatacatgtgttgtttgtcattcaatgatttgattttttgattatttttgataacaatagtaacaacaataataggcctatattggggcgtaatcattaatattcggggcatttagcctacataatatttgatggggggcgttagggacctggataatggataggggggcgctggcacaaaaaaggttgagaaccactggccTATGGGGTCACCTGCCAAAAAGAGCTGAATGCTGGAATGTGaccacaaggaatttgactgaTGTAGACTTTAAACTTTGCAATGATCAAGGTAACTGTGGCCCTTTTCTACCTTGTGTCATTTTTACATTCCAGTACCTCACATGCACACTGCACTGTGCTAAACTGTATCAGATCTTCAGGCCCAGCAGACAATCCACACACTGTCTGCTGATAGCCTCCCTGGTTGTTTCCCTTGAGGGAGTTACaagggggtccccagcaaacAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67797 True 472 lncRNA 0.43 1 17683048 17683519

Neighbor

gene id symbol gene type direction distance location
LOC120558364 ythdf1,LOC107096006,LOC105906423 coding downstream 691 17671661 ~ 17682357 (-)
bhlhe23 bhlhe23,LOC102799046 coding downstream 66841 17614435 ~ 17616207 (-)
dnah12 dnah12 coding downstream 110847 17547203 ~ 17572201 (-)
asb14b LOC100700796,LOC102307994,LOC103354452,LOC102775635,LOC102205832,LOC101483549 coding downstream 136742 17542599 ~ 17546306 (-)
tasorb LOC103354451 coding downstream 140926 17521928 ~ 17542122 (-)
nkain4 nkain4,LOC106924573 coding upstream 6436 17689955 ~ 17736828 (-)
uckl1b uckl1,LOC102795005,LOC103372048 coding upstream 231737 17915256 ~ 17935671 (-)
znf512b znf512b coding upstream 252975 17936494 ~ 17970913 (-)
b4galt5 b4galt5,LOC104935810,LOC102792691,LOC100696774 coding upstream 476655 18160174 ~ 18190215 (-)
spata2 spata2 coding upstream 651882 18335401 ~ 18340591 (-)
G50647 NA non-coding downstream 212373 17470207 ~ 17470675 (-)
G50574 NA non-coding downstream 431774 17250650 ~ 17251274 (-)
G50561 NA non-coding downstream 477419 17203747 ~ 17205629 (-)
G50567 slc6a6,LOC106905582,LOC103145023,LOC101165803 non-coding downstream 489413 17190077 ~ 17193635 (-)
G50553 NA non-coding downstream 529621 17152200 ~ 17153427 (-)
G50779 LOC102310871,LOC107096010,LOC102797073 non-coding upstream 99169 17782688 ~ 17786360 (-)
G50803 prpf6,LOC107673318,LOC102793577 non-coding upstream 356890 18040409 ~ 18041404 (-)
G50808 NA non-coding upstream 370500 18054019 ~ 18057349 (-)
G50848 NA non-coding upstream 556340 18239859 ~ 18240070 (-)
G50867 NA non-coding upstream 600657 18284176 ~ 18284510 (-)
LOC120559328 smim4 other downstream 568001 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 1399192 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2829231 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 3131490 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 3148443 14532124 ~ 14534605 (-)
G50712 birc7 other upstream 4596 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 151561 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 290774 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1191236 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 1262449 18945968 ~ 19077781 (-)

Expression


Co-expression Network